This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2f40

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:40, 1 May 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2f40.png|left|200px]]
 
-
<!--
+
==Structure of a Novel Protein from Backbone-Centered NMR Data and NMR-Assisted Structure Prediction==
-
The line below this paragraph, containing "STRUCTURE_2f40", creates the "Structure Box" on the page.
+
<StructureSection load='2f40' size='340' side='right'caption='[[2f40]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2f40]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus_DSM_3638 Pyrococcus furiosus DSM 3638]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F40 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F40 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f40 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f40 OCA], [https://pdbe.org/2f40 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f40 RCSB], [https://www.ebi.ac.uk/pdbsum/2f40 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f40 ProSAT]</span></td></tr>
-
{{STRUCTURE_2f40| PDB=2f40 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Structure of a Novel Protein from Backbone-Centered NMR Data and NMR-Assisted Structure Prediction===
+
[https://www.uniprot.org/uniprot/Q8U0X6_PYRFU Q8U0X6_PYRFU]
-
 
+
__TOC__
-
 
+
</StructureSection>
-
<!--
+
[[Category: Large Structures]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_16927360}}, adds the Publication Abstract to the page
+
[[Category: Pyrococcus furiosus DSM 3638]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 16927360 is the PubMed ID number.
+
[[Category: Bansal S]]
-
-->
+
[[Category: Prestegard JH]]
-
{{ABSTRACT_PUBMED_16927360}}
+
-
 
+
-
==About this Structure==
+
-
2F40 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F40 OCA].
+
-
 
+
-
==Reference==
+
-
Structure determination of a new protein from backbone-centered NMR data and NMR-assisted structure prediction., Mayer KL, Qu Y, Bansal S, LeBlond PD, Jenney FE Jr, Brereton PS, Adams MW, Xu Y, Prestegard JH, Proteins. 2006 Nov 1;65(2):480-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16927360 16927360]
+
-
[[Category: Pyrococcus furiosus]]
+
-
[[Category: Single protein]]
+
-
[[Category: Bansal, S.]]
+
-
[[Category: Prestegard, J H.]]
+
-
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Protein structure prediction]]
+
-
[[Category: Psi]]
+
-
[[Category: Pyrococcus furious]]
+
-
[[Category: Residual dipolar coupling]]
+
-
[[Category: Secsg]]
+
-
[[Category: Simulated annealing]]
+
-
[[Category: Southeast collaboratory for structural genomic]]
+
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 15:43:16 2008''
+

Current revision

Structure of a Novel Protein from Backbone-Centered NMR Data and NMR-Assisted Structure Prediction

PDB ID 2f40

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools