This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1sjj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:31, 14 February 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1sjj.png|left|200px]]
 
-
<!--
+
==Cryo-EM Structure of Chicken Gizzard Smooth Muscle alpha-Actinin==
-
The line below this paragraph, containing "STRUCTURE_1sjj", creates the "Structure Box" on the page.
+
<StructureSection load='1sjj' size='340' side='right'caption='[[1sjj]], [[Resolution|resolution]] 20.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1sjj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SJJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SJJ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron crystallography, [[Resolution|Resolution]] 20&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sjj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sjj OCA], [https://pdbe.org/1sjj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sjj RCSB], [https://www.ebi.ac.uk/pdbsum/1sjj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sjj ProSAT]</span></td></tr>
-
{{STRUCTURE_1sjj| PDB=1sjj | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ACTN1_CHICK ACTN1_CHICK] F-actin cross-linking protein is thought to anchor actin to a variety of intracellular structures. This is a bundling protein.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sj/1sjj_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sjj ConSurf].
 +
<div style="clear:both"></div>
-
===Cryo-EM Structure of Chicken Gizzard Smooth Muscle alpha-Actinin===
+
==See Also==
-
 
+
*[[Actinin 3D structures|Actinin 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_15050827}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 15050827 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_15050827}}
+
-
 
+
-
==About this Structure==
+
-
1SJJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SJJ OCA].
+
-
 
+
-
==Reference==
+
-
A 3-D reconstruction of smooth muscle alpha-actinin by CryoEm reveals two different conformations at the actin-binding region., Liu J, Taylor DW, Taylor KA, J Mol Biol. 2004 Apr 16;338(1):115-25. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15050827 15050827]
+
-
 
+
-
Projection image of smooth muscle alpha-actinin from two-dimensional crystals formed on positively charged lipid layers., Taylor KA, Taylor DW, J Mol Biol. 1993 Mar 5;230(1):196-205. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8450536 8450536]
+
-
 
+
-
The three-dimensional structure of alpha-actinin obtained by cryoelectron microscopy suggests a model for Ca(2+)-dependent actin binding., Tang J, Taylor DW, Taylor KA, J Mol Biol. 2001 Jul 20;310(4):845-58. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11453692 11453692]
+
-
 
+
-
Isoforms of alpha-actinin from cardiac, smooth, and skeletal muscle form polar arrays of actin filaments., Taylor KA, Taylor DW, Schachat F, J Cell Biol. 2000 May 1;149(3):635-46. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10791977 10791977]
+
[[Category: Gallus gallus]]
[[Category: Gallus gallus]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Liu, J.]]
+
[[Category: Liu J]]
-
[[Category: Taylor, D W.]]
+
[[Category: Taylor DW]]
-
[[Category: Taylor, K A.]]
+
[[Category: Taylor KA]]
-
[[Category: 3-helix bundle]]
+
-
[[Category: Actin binding protein]]
+
-
[[Category: Calmodulin-like domain]]
+
-
[[Category: Calponin homology domain]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 16:10:06 2008''
+

Current revision

Cryo-EM Structure of Chicken Gizzard Smooth Muscle alpha-Actinin

PDB ID 1sjj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1sjj"
Personal tools