1ny5

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{{Seed}}
 
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[[Image:1ny5.png|left|200px]]
 
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==Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state==
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The line below this paragraph, containing "STRUCTURE_1ny5", creates the "Structure Box" on the page.
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<StructureSection load='1ny5' size='340' side='right'caption='[[1ny5]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1ny5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NY5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NY5 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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{{STRUCTURE_1ny5| PDB=1ny5 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ny5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ny5 OCA], [https://pdbe.org/1ny5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ny5 RCSB], [https://www.ebi.ac.uk/pdbsum/1ny5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ny5 ProSAT]</span></td></tr>
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</table>
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===Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state===
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== Function ==
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[https://www.uniprot.org/uniprot/O67198_AQUAE O67198_AQUAE]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 14561776 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ny/1ny5_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_14561776}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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1NY5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NY5 OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ny5 ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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Regulation of the transcriptional activator NtrC1: structural studies of the regulatory and AAA+ ATPase domains., Lee SY, De La Torre A, Yan D, Kustu S, Nixon BT, Wemmer DE, Genes Dev. 2003 Oct 15;17(20):2552-63. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/14561776 14561776]
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</StructureSection>
[[Category: Aquifex aeolicus]]
[[Category: Aquifex aeolicus]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Kustu, S.]]
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[[Category: Kustu S]]
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[[Category: Lee, S Y.]]
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[[Category: Lee SY]]
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[[Category: Nixon, B T.]]
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[[Category: Nixon BT]]
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[[Category: Torre, A de la.]]
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[[Category: Wemmer DE]]
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[[Category: Wemmer, D E.]]
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[[Category: De la Torre A]]
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[[Category: Aaa+ atpase]]
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[[Category: Bacterial transcription]]
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[[Category: Dimer]]
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[[Category: Sigma54 activator]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 16:46:51 2008''
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Current revision

Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state

PDB ID 1ny5

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