This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2drj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:28, 25 October 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2drj.png|left|200px]]
 
-
<!--
+
==Xray structure of alpha-2,3/8-sialyltransferase CstII F91Y mutant==
-
The line below this paragraph, containing "STRUCTURE_2drj", creates the "Structure Box" on the page.
+
<StructureSection load='2drj' size='340' side='right'caption='[[2drj]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2drj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DRJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DRJ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSF:CYTIDINE-5-MONOPHOSPHATE-3-FLUORO-N-ACETYL-NEURAMINIC+ACID'>CSF</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene></td></tr>
-
{{STRUCTURE_2drj| PDB=2drj | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2drj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2drj OCA], [https://pdbe.org/2drj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2drj RCSB], [https://www.ebi.ac.uk/pdbsum/2drj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2drj ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9LAK3_CAMJU Q9LAK3_CAMJU]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dr/2drj_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2drj ConSurf].
 +
<div style="clear:both"></div>
-
===Xray structure of alpha-2,3/8-sialyltransferase CstII F91Y mutant===
+
==See Also==
-
 
+
*[[Sialyltransferase 3D structures|Sialyltransferase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2DRJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DRJ OCA].
+
-
 
+
-
==Reference==
+
-
The charged sialic acid exhibits its power again: a new high-throughput screening technology., Wang PG, Nat Methods. 2006 Aug;3(8):589-90. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16862130 16862130]
+
[[Category: Campylobacter jejuni]]
[[Category: Campylobacter jejuni]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Chiu, C P.C.]]
+
[[Category: Chiu CPC]]
-
[[Category: Strynadka, N C.J.]]
+
[[Category: Strynadka NCJ]]
-
[[Category: Mixed alpha/beta]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 17:55:20 2008''
+

Current revision

Xray structure of alpha-2,3/8-sialyltransferase CstII F91Y mutant

PDB ID 2drj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools