2g0c

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{{Seed}}
 
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[[Image:2g0c.png|left|200px]]
 
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==Structure of the RNA binding domain (residues 404-479) of the Bacillus subtilis YxiN protein==
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The line below this paragraph, containing "STRUCTURE_2g0c", creates the "Structure Box" on the page.
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<StructureSection load='2g0c' size='340' side='right'caption='[[2g0c]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2g0c]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G0C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G0C FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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{{STRUCTURE_2g0c| PDB=2g0c | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g0c OCA], [https://pdbe.org/2g0c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g0c RCSB], [https://www.ebi.ac.uk/pdbsum/2g0c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g0c ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/DBPA_BACSU DBPA_BACSU] DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes (Probable).<ref>PMID:10481020</ref> <ref>PMID:19474341</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g0/2g0c_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g0c ConSurf].
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<div style="clear:both"></div>
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===Structure of the RNA binding domain (residues 404-479) of the Bacillus subtilis YxiN protein===
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==See Also==
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*[[Helicase 3D structures|Helicase 3D structures]]
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== References ==
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__TOC__
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(as it appears on PubMed at http://www.pubmed.gov), where 16611943 is the PubMed ID number.
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</StructureSection>
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{{ABSTRACT_PUBMED_16611943}}
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==About this Structure==
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2G0C is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G0C OCA].
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==Reference==
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The domain of the Bacillus subtilis DEAD-box helicase YxiN that is responsible for specific binding of 23S rRNA has an RNA recognition motif fold., Wang S, Hu Y, Overgaard MT, Karginov FV, Uhlenbeck OC, McKay DB, RNA. 2006 Jun;12(6):959-67. Epub 2006 Apr 12. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16611943 16611943]
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[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: McKay, D B.]]
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[[Category: McKay DB]]
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[[Category: Rna recognition motif]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 18:04:07 2008''
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Current revision

Structure of the RNA binding domain (residues 404-479) of the Bacillus subtilis YxiN protein

PDB ID 2g0c

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