1rkd

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{{Seed}}
 
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[[Image:1rkd.png|left|200px]]
 
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==E. COLI RIBOKINASE COMPLEXED WITH RIBOSE AND ADP==
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The line below this paragraph, containing "STRUCTURE_1rkd", creates the "Structure Box" on the page.
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<StructureSection load='1rkd' size='340' side='right'caption='[[1rkd]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1rkd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RKD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RKD FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=RIB:RIBOSE'>RIB</scene></td></tr>
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{{STRUCTURE_1rkd| PDB=1rkd | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rkd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rkd OCA], [https://pdbe.org/1rkd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rkd RCSB], [https://www.ebi.ac.uk/pdbsum/1rkd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rkd ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RBSK_ECOLI RBSK_ECOLI]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rk/1rkd_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1rkd ConSurf].
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<div style="clear:both"></div>
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===E. COLI RIBOKINASE COMPLEXED WITH RIBOSE AND ADP===
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==See Also==
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*[[Ribokinase 3D structures|Ribokinase 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_9519409}}, adds the Publication Abstract to the page
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[[Category: Escherichia coli K-12]]
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(as it appears on PubMed at http://www.pubmed.gov), where 9519409 is the PubMed ID number.
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[[Category: Large Structures]]
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[[Category: Cameron AD]]
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{{ABSTRACT_PUBMED_9519409}}
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[[Category: Jones TA]]
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[[Category: Mowbray SL]]
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==About this Structure==
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[[Category: Sigrell JA]]
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1RKD is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RKD OCA].
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==Reference==
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Structure of Escherichia coli ribokinase in complex with ribose and dinucleotide determined to 1.8 A resolution: insights into a new family of kinase structures., Sigrell JA, Cameron AD, Jones TA, Mowbray SL, Structure. 1998 Feb 15;6(2):183-93. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9519409 9519409]
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[[Category: Escherichia coli]]
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[[Category: Ribokinase]]
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[[Category: Single protein]]
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[[Category: Cameron, A D.]]
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[[Category: Jones, T A.]]
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[[Category: Mowbray, S L.]]
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[[Category: Sigrell, J A.]]
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[[Category: Carbohydrate kinase]]
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[[Category: Nucleotide binding]]
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[[Category: Ribose]]
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[[Category: Transferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 18:43:15 2008''
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Current revision

E. COLI RIBOKINASE COMPLEXED WITH RIBOSE AND ADP

PDB ID 1rkd

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