1vrm

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{{Seed}}
 
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[[Image:1vrm.png|left|200px]]
 
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==Crystal structure of the apbe protein (tm1553) from thermotoga maritima msb8 at 1.58 A resolution==
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The line below this paragraph, containing "STRUCTURE_1vrm", creates the "Structure Box" on the page.
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<StructureSection load='1vrm' size='340' side='right'caption='[[1vrm]], [[Resolution|resolution]] 1.58&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1vrm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima_MSB8 Thermotoga maritima MSB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VRM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VRM FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.58&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_1vrm| PDB=1vrm | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vrm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vrm OCA], [https://pdbe.org/1vrm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vrm RCSB], [https://www.ebi.ac.uk/pdbsum/1vrm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vrm ProSAT], [https://www.topsan.org/Proteins/JCSG/1vrm TOPSAN]</span></td></tr>
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</table>
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===Crystal structure of the ApbE protein (TM1553) from Thermotoga maritima at 1.58 A resolution===
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== Function ==
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[https://www.uniprot.org/uniprot/Q9X1N9_THEMA Q9X1N9_THEMA]
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== Evolutionary Conservation ==
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==About this Structure==
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[[Image:Consurf_key_small.gif|200px|right]]
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1VRM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima_msb8 Thermotoga maritima msb8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VRM OCA].
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Check<jmol>
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<jmolCheckbox>
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==Reference==
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vr/1vrm_consurf.spt"</scriptWhenChecked>
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Crystal structure of the ApbE protein (TM1553) from Thermotoga maritima at 1.58 A resolution., Han GW, Sri Krishna S, Schwarzenbacher R, McMullan D, Ginalski K, Elsliger MA, Brittain SM, Abdubek P, Agarwalla S, Ambing E, Astakhova T, Axelrod H, Canaves JM, Chiu HJ, DiDonato M, Grzechnik SK, Hale J, Hampton E, Haugen J, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Koesema E, Kreusch A, Kuhn P, Miller MD, Morse AT, Moy K, Nigoghossian E, Oommachen S, Ouyang J, Paulsen J, Quijano K, Reyes R, Rife C, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, Wang X, West B, White A, Wolf G, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA, Proteins. 2006 Sep 1;64(4):1083-90. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16779835 16779835]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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[[Category: Single protein]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Thermotoga maritima msb8]]
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</jmolCheckbox>
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[[Category: JCSG, Joint Center for Structural Genomics.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vrm ConSurf].
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[[Category: Hypothetical protein]]
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<div style="clear:both"></div>
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[[Category: Jcsg]]
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__TOC__
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[[Category: Joint center for structural genomic]]
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</StructureSection>
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[[Category: Protein structure initiative]]
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[[Category: Large Structures]]
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[[Category: Psi]]
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[[Category: Thermotoga maritima MSB8]]
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[[Category: Structural genomic]]
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[[Category: Tm1553]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 18:48:06 2008''
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Current revision

Crystal structure of the apbe protein (tm1553) from thermotoga maritima msb8 at 1.58 A resolution

PDB ID 1vrm

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