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2d1e

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{{Seed}}
 
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[[Image:2d1e.png|left|200px]]
 
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==Crystal structure of PcyA-biliverdin complex==
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The line below this paragraph, containing "STRUCTURE_2d1e", creates the "Structure Box" on the page.
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<StructureSection load='2d1e' size='340' side='right'caption='[[2d1e]], [[Resolution|resolution]] 1.51&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2d1e]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechocystis_sp._PCC_6803 Synechocystis sp. PCC 6803]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D1E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D1E FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.51&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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{{STRUCTURE_2d1e| PDB=2d1e | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d1e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d1e OCA], [https://pdbe.org/2d1e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d1e RCSB], [https://www.ebi.ac.uk/pdbsum/2d1e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d1e ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PCYA_SYNY3 PCYA_SYNY3] Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin (By similarity).
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d1/2d1e_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d1e ConSurf].
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<div style="clear:both"></div>
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===Crystal structure of PcyA-biliverdin complex===
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==See Also==
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*[[Phycocyanobilin:ferredoxin oxidoreductase|Phycocyanobilin:ferredoxin oxidoreductase]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_16380422}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 16380422 is the PubMed ID number.
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[[Category: Synechocystis sp. PCC 6803]]
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[[Category: Fukuyama K]]
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{{ABSTRACT_PUBMED_16380422}}
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[[Category: Hagiwara Y]]
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[[Category: Sugishima M]]
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==About this Structure==
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[[Category: Takahashi Y]]
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2D1E is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D1E OCA].
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==Reference==
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Crystal structure of phycocyanobilin:ferredoxin oxidoreductase in complex with biliverdin IXalpha, a key enzyme in the biosynthesis of phycocyanobilin., Hagiwara Y, Sugishima M, Takahashi Y, Fukuyama K, Proc Natl Acad Sci U S A. 2006 Jan 3;103(1):27-32. Epub 2005 Dec 27. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16380422 16380422]
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[[Category: Phycocyanobilin:ferredoxin oxidoreductase]]
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[[Category: Single protein]]
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[[Category: Synechocystis sp.]]
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[[Category: Fukuyama, K.]]
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[[Category: Hagiwara, Y.]]
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[[Category: Sugishima, M.]]
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[[Category: Takahashi, Y.]]
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[[Category: Alpha-beta-alpha sandwich]]
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[[Category: Enzyme-substrate complex]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 19:00:27 2008''
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Current revision

Crystal structure of PcyA-biliverdin complex

PDB ID 2d1e

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