1q5f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:01, 17 April 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1q5f.png|left|200px]]
 
-
<!--
+
==NMR Structure of Type IVb pilin (PilS) from Salmonella typhi==
-
The line below this paragraph, containing "STRUCTURE_1q5f", creates the "Structure Box" on the page.
+
<StructureSection load='1q5f' size='340' side='right'caption='[[1q5f]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1q5f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhi Salmonella enterica subsp. enterica serovar Typhi]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q5F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Q5F FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1q5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q5f OCA], [https://pdbe.org/1q5f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1q5f RCSB], [https://www.ebi.ac.uk/pdbsum/1q5f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1q5f ProSAT]</span></td></tr>
-
{{STRUCTURE_1q5f| PDB=1q5f | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9ZIU9_SALTI Q9ZIU9_SALTI]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q5/1q5f_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1q5f ConSurf].
 +
<div style="clear:both"></div>
-
===NMR Structure of Type IVb pilin (PilS) from Salmonella typhi===
+
==See Also==
-
 
+
*[[Pilin 3D structures|Pilin 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_15159389}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 15159389 is the PubMed ID number.
+
[[Category: Salmonella enterica subsp. enterica serovar Typhi]]
-
-->
+
[[Category: Hackett J]]
-
{{ABSTRACT_PUBMED_15159389}}
+
[[Category: Mok YK]]
-
 
+
[[Category: Tan YW]]
-
==About this Structure==
+
[[Category: Xu XF]]
-
1Q5F is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_typhi Salmonella typhi]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q5F OCA].
+
[[Category: Zhang M]]
-
 
+
-
==Reference==
+
-
NMR structure of a type IVb pilin from Salmonella typhi and its assembly into pilus., Xu XF, Tan YW, Lam L, Hackett J, Zhang M, Mok YK, J Biol Chem. 2004 Jul 23;279(30):31599-605. Epub 2004 May 24. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15159389 15159389]
+
-
[[Category: Salmonella typhi]]
+
-
[[Category: Single protein]]
+
-
[[Category: Hackett, J.]]
+
-
[[Category: Mok, Y K.]]
+
-
[[Category: Tan, Y W.]]
+
-
[[Category: Xu, X F.]]
+
-
[[Category: Zhang, M.]]
+
-
[[Category: Alpha-beta roll]]
+
-
[[Category: Monomer]]
+
-
[[Category: Type ivb pilin]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 19:03:25 2008''
+

Current revision

NMR Structure of Type IVb pilin (PilS) from Salmonella typhi

PDB ID 1q5f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools