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1yqd

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{{Seed}}
 
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[[Image:1yqd.png|left|200px]]
 
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<!--
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==Sinapyl Alcohol Dehydrogenase complexed with NADP+==
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The line below this paragraph, containing "STRUCTURE_1yqd", creates the "Structure Box" on the page.
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<StructureSection load='1yqd' size='340' side='right'caption='[[1yqd]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1yqd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Populus_tremuloides Populus tremuloides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YQD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YQD FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DTT:2,3-DIHYDROXY-1,4-DITHIOBUTANE'>DTT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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{{STRUCTURE_1yqd| PDB=1yqd | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yqd OCA], [https://pdbe.org/1yqd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yqd RCSB], [https://www.ebi.ac.uk/pdbsum/1yqd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yqd ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q94G59_POPTM Q94G59_POPTM]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yq/1yqd_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yqd ConSurf].
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<div style="clear:both"></div>
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===Sinapyl Alcohol Dehydrogenase complexed with NADP+===
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==See Also==
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*[[Alcohol dehydrogenase 3D structures|Alcohol dehydrogenase 3D structures]]
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__TOC__
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<!--
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_15829607}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 15829607 is the PubMed ID number.
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{{ABSTRACT_PUBMED_15829607}}
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==About this Structure==
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1YQD is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Populus_tremuloides Populus tremuloides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YQD OCA].
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==Reference==
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Structural and kinetic basis for substrate selectivity in Populus tremuloides sinapyl alcohol dehydrogenase., Bomati EK, Noel JP, Plant Cell. 2005 May;17(5):1598-611. Epub 2005 Apr 13. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15829607 15829607]
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[[Category: Cinnamyl-alcohol dehydrogenase]]
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[[Category: Populus tremuloides]]
[[Category: Populus tremuloides]]
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[[Category: Single protein]]
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[[Category: Bomati EK]]
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[[Category: Bomati, E K.]]
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[[Category: Noel JP]]
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[[Category: Noel, J P.]]
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[[Category: Biosynthesis]]
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[[Category: Lignin]]
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[[Category: Medium-chain dehydrogense/reductase]]
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[[Category: Monolignol]]
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[[Category: Oxidoreductase]]
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[[Category: Plant defense]]
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[[Category: Substrate inhibition]]
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[[Category: Zinc-dependent]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 19:30:05 2008''
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Current revision

Sinapyl Alcohol Dehydrogenase complexed with NADP+

PDB ID 1yqd

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