1ss3

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{{Seed}}
 
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[[Image:1ss3.png|left|200px]]
 
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==Solution structure of Ole e 6, an allergen from olive tree pollen==
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The line below this paragraph, containing "STRUCTURE_1ss3", creates the "Structure Box" on the page.
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<StructureSection load='1ss3' size='340' side='right'caption='[[1ss3]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1ss3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Olea_europaea Olea europaea]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SS3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SS3 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ss3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ss3 OCA], [https://pdbe.org/1ss3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ss3 RCSB], [https://www.ebi.ac.uk/pdbsum/1ss3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ss3 ProSAT]</span></td></tr>
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{{STRUCTURE_1ss3| PDB=1ss3 | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/ALL6_OLEEU ALL6_OLEEU]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Ole e 6 is a pollen protein from the olive tree (Olea europaea) that exhibits allergenic activity with a high prevalence among olive-allergic individuals. The three-dimensional structure of Ole e 6 has been determined in solution by NMR methods. This is the first experimentally determined structure of an olive tree pollen allergen. The structure of this 50-residue protein is based on 486 upper limit distance constraints derived from nuclear Overhauser effects and 24 torsion angle restraints. The global fold of Ole e 6 consists of two nearly antiparallel alpha-helices, spanning residues 3-19 and 23-33, that are connected by a short loop and followed by a long, unstructured C-terminal tail. Viewed edge-on, the structured N terminus has a dumbbell-like shape with the two helices on the outside and with the hydrophobic core, mainly composed of 3 aromatic and 6 cysteine residues, on the inside. All the aromatic rings lie on top of and pack against the three disulfide bonds. The lack of thermal unfolding, even at 85 degrees C, indicates a high conformational stability. Based on the analysis of the molecular surface, we propose five plausible epitopes for IgE recognition. The results presented here provide the structural foundation for future experiments to verify the antigenicity of the proposed epitopes, as well as to design novel hypoallergenic forms of the protein suitable for diagnosis and treatment of type-I allergies. In addition, three-dimensional structure features of Ole e 6 are discussed to provide a basis for future functional studies.
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===Solution structure of Ole e 6, an allergen from olive tree pollen===
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NMR solution structure of Ole e 6, a major allergen from olive tree pollen.,Trevino MA, Garcia-Mayoral MF, Barral P, Villalba M, Santoro J, Rico M, Rodriguez R, Bruix M J Biol Chem. 2004 Sep 10;279(37):39035-41. Epub 2004 Jul 7. PMID:15247256<ref>PMID:15247256</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_15247256}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 1ss3" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 15247256 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_15247256}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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1SS3 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Olea_europaea Olea europaea]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SS3 OCA].
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==Reference==
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NMR solution structure of Ole e 6, a major allergen from olive tree pollen., Trevino MA, Garcia-Mayoral MF, Barral P, Villalba M, Santoro J, Rico M, Rodriguez R, Bruix M, J Biol Chem. 2004 Sep 10;279(37):39035-41. Epub 2004 Jul 7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15247256 15247256]
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[[Category: Olea europaea]]
[[Category: Olea europaea]]
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[[Category: Single protein]]
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[[Category: Barral P]]
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[[Category: Barral, P.]]
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[[Category: Bruix M]]
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[[Category: Bruix, M.]]
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[[Category: Garcia-Mayoral MF]]
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[[Category: Garcia-Mayoral, M F.]]
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[[Category: Rico M]]
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[[Category: Rico, M.]]
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[[Category: Rodriguez R]]
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[[Category: Rodriguez, R.]]
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[[Category: Santoro J]]
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[[Category: Santoro, J.]]
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[[Category: Trevino MA]]
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[[Category: Trevino, M A.]]
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[[Category: Villalba M]]
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[[Category: Villalba, M.]]
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[[Category: Alpha-helix protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 19:46:15 2008''
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Current revision

Solution structure of Ole e 6, an allergen from olive tree pollen

PDB ID 1ss3

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