2ysu
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2ysu" size="450" color="white" frame="true" align="right" spinBox="true" caption="2ysu, resolution 3.50Å" /> '''Structure of the com...) |
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| - | [[Image:2ysu.jpg|left|200px]]<br /><applet load="2ysu" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2ysu, resolution 3.50Å" /> | ||
| - | '''Structure of the complex between BtuB and Colicin E2 receptor binding domain'''<br /> | ||
| - | == | + | ==Structure of the complex between BtuB and Colicin E2 receptor binding domain== |
| - | + | <StructureSection load='2ysu' size='340' side='right'caption='[[2ysu]], [[Resolution|resolution]] 3.50Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[2ysu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YSU FirstGlance]. <br> |
| - | [ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.5Å</td></tr> |
| - | [[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ysu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ysu OCA], [https://pdbe.org/2ysu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ysu RCSB], [https://www.ebi.ac.uk/pdbsum/2ysu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ysu ProSAT]</span></td></tr> |
| - | [ | + | </table> |
| - | [[ | + | == Function == |
| - | [ | + | [https://www.uniprot.org/uniprot/BTUB_ECOLI BTUB_ECOLI] Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB. Is also a receptor for bacteriophages BF23 and C1, and for A and E colicins.[HAMAP-Rule:MF_01531] |
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ys/2ysu_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ysu ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[BtuB 3D structures|BtuB 3D structures]] | ||
| + | *[[Colicin 3D structures|Colicin 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Escherichia coli]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Cramer WA]] | ||
| + | [[Category: Sharma O]] | ||
| + | [[Category: Yamashita E]] | ||
Current revision
Structure of the complex between BtuB and Colicin E2 receptor binding domain
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