2jte

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{{Seed}}
 
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[[Image:2jte.png|left|200px]]
 
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==Third SH3 domain of CD2AP==
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The line below this paragraph, containing "STRUCTURE_2jte", creates the "Structure Box" on the page.
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<StructureSection load='2jte' size='340' side='right'caption='[[2jte]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2jte]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JTE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JTE FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jte FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jte OCA], [https://pdbe.org/2jte PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jte RCSB], [https://www.ebi.ac.uk/pdbsum/2jte PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jte ProSAT]</span></td></tr>
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{{STRUCTURE_2jte| PDB=2jte | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CD2AP_MOUSE CD2AP_MOUSE] Required for cytokinesis (By similarity). Seems to act as an adapter protein between membrane proteins and the actin cytoskeleton. May play a role in receptor clustering and cytoskeletal polarity in the junction between T-cell and antigen-presenting cell. May anchor the podocyte slit diaphragm to the actin cytoskeleton in renal glomerolus.<ref>PMID:10514378</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jt/2jte_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jte ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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CD2 associated protein (CD2AP) is an adaptor protein that plays an important role in cell to cell union needed for the kidney function. CD2AP interacts, as an adaptor protein, with different natural targets, such as CD2, nefrin, c-Cbl and podocin. These proteins are believed to interact to one of the three SH3 domains that are positioned in the N-terminal region of CD2AP. To understand the network of interactions between the natural targets and the three SH3 domains (SH3-A, B and C), we have started to determine the structures of the individual SH3 domains. Here we present the high-resolution structure of the SH3-C domain derived from NMR data. Full backbone and side-chain assignments were obtained from triple-resonance spectra. The structure was determined from distance restraints derived from high-resolution 600 and 800 MHz NOESY spectra, together with phi and psi torsion angle restraints based on the analysis of 1HN, 15N, 1Halpha, 13Calpha, 13CO and 13Cbeta chemical shifts. Structures were calculated using CYANA and refined in water using RECOORD. The three-dimensional structure of CD2AP SH3-C contains all the features that are typically found in other SH3 domains, including the general binding site for the recognition of polyproline sequences.
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===Third SH3 domain of CD2AP===
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The high resolution NMR structure of the third SH3 domain of CD2AP.,Ortega Roldan JL, Romero Romero ML, Ora A, Ab E, Lopez Mayorga O, Azuaga AI, van Nuland NA J Biomol NMR. 2007 Dec;39(4):331-6. Epub 2007 Oct 9. PMID:17922258<ref>PMID:17922258</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 2jte" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_17922258}}, adds the Publication Abstract to the page
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*[[CD2-associated protein 3D structures|CD2-associated protein 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 17922258 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_17922258}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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2JTE is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JTE OCA].
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==Reference==
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The high resolution NMR structure of the third SH3 domain of CD2AP., Ortega Roldan JL, Romero Romero ML, Ora A, Ab E, Lopez Mayorga O, Azuaga AI, van Nuland NA, J Biomol NMR. 2007 Dec;39(4):331-6. Epub 2007 Oct 9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17922258 17922258]
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[[Category: Mus musculus]]
[[Category: Mus musculus]]
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[[Category: Single protein]]
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[[Category: Ab E]]
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[[Category: Ab, E.]]
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[[Category: Azuaga AI]]
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[[Category: Azuaga, A I.]]
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[[Category: Lopez MO]]
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[[Category: Lopez, M O.]]
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[[Category: Ora A]]
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[[Category: Nuland, N A.J van.]]
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[[Category: Ortega RJ]]
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[[Category: Ora, A.]]
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[[Category: Romero Romero M]]
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[[Category: Ortega, R J.]]
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[[Category: Van Nuland NAJ]]
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[[Category: Romero, M Romero.]]
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[[Category: Coiled coil]]
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[[Category: Cytoplasm]]
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[[Category: Phosphorylation]]
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[[Category: Protein]]
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[[Category: Sh3 domain]]
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[[Category: Sh3-binding]]
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[[Category: Signaling protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 22:30:19 2008''
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Current revision

Third SH3 domain of CD2AP

PDB ID 2jte

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