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1qrj

From Proteopedia

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{{Seed}}
 
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[[Image:1qrj.png|left|200px]]
 
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==Solution structure of htlv-i capsid protein==
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The line below this paragraph, containing "STRUCTURE_1qrj", creates the "Structure Box" on the page.
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<StructureSection load='1qrj' size='340' side='right'caption='[[1qrj]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1qrj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_T-cell_lymphotrophic_virus_type_1_(strain_ATK) Human T-cell lymphotrophic virus type 1 (strain ATK)]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QRJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QRJ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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-->
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qrj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qrj OCA], [https://pdbe.org/1qrj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qrj RCSB], [https://www.ebi.ac.uk/pdbsum/1qrj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qrj ProSAT]</span></td></tr>
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{{STRUCTURE_1qrj| PDB=1qrj | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/GAG_HTL1A GAG_HTL1A] Matrix protein p19 targets Gag, Gag-Pro and Gag-Pro-Pol polyproteins to the plasma membrane via a multipartite membrane binding signal, that includes its myristoylated N-terminus. Also mediates nuclear localization of the preintegration complex (By similarity). Capsid protein p24 forms the conical core of the virus that encapsulates the genomic RNA-nucleocapsid complex (By similarity). Nucleocapsid protein p15 is involved in the packaging and encapsidation of two copies of the genome (By similarity).
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qr/1qrj_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1qrj ConSurf].
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<div style="clear:both"></div>
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===SOLUTION STRUCTURE OF HTLV-I CAPSID PROTEIN===
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==See Also==
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*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
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__TOC__
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==About this Structure==
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</StructureSection>
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1QRJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Human_t-cell_leukemia_virus_type_i Human t-cell leukemia virus type i]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QRJ OCA].
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[[Category: Large Structures]]
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[[Category: Campos-Olivas R]]
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==Reference==
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[[Category: Clark CA]]
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Sequence-specific 1H, 13C and 15N chemical shift assignment and secondary structure of the HTLV-I capsid protein., Khorasanizadeh S, Campos-Olivas R, Clark CA, Summers MF, J Biomol NMR. 1999 Jun;14(2):199-200. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10427751 10427751]
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[[Category: Khorasanizadeh S]]
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[[Category: Human t-cell leukemia virus type i]]
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[[Category: Summers MF]]
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[[Category: Single protein]]
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[[Category: Campos-Olivas, R.]]
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[[Category: Clark, C A.]]
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[[Category: Khorasanizadeh, S.]]
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[[Category: Summers, M F.]]
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[[Category: Alpha helical protein]]
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[[Category: Capsid protein]]
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[[Category: Heteronuclear nmr spectroscopy]]
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[[Category: Htlv-i]]
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[[Category: Retrovirus]]
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[[Category: Two-domain protein]]
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[[Category: Virus/viral protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 22:52:17 2008''
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Current revision

Solution structure of htlv-i capsid protein

PDB ID 1qrj

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