This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.




4ull

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="4ull" size="450" color="white" frame="true" align="right" spinBox="true" caption="4ull" /> '''SOLUTION NMR STRUCTURE OF VEROTOXIN-1 B-SUBU...)
Current revision (08:30, 23 October 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4ull.jpg|left|200px]]<br /><applet load="4ull" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="4ull" />
 
-
'''SOLUTION NMR STRUCTURE OF VEROTOXIN-1 B-SUBUNIT FROM E. COLI, 5 STRUCTURES'''<br />
 
-
==About this Structure==
+
==SOLUTION NMR STRUCTURE OF VEROTOXIN-1 B-SUBUNIT FROM E. COLI, 5 STRUCTURES==
-
4ULL is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacteriophage_h30_and_h19b Bacteriophage h30 and h19b]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=4ULL OCA].
+
<StructureSection load='4ull' size='340' side='right'caption='[[4ull]]' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4ull]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ULL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ULL FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 5 models</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ull FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ull OCA], [https://pdbe.org/4ull PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ull RCSB], [https://www.ebi.ac.uk/pdbsum/4ull PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ull ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/STXB_BPH19 STXB_BPH19] The B subunit is responsible for the binding of the holotoxin to specific receptors on the target cell surface, such as globotriaosylceramide (Gb3) in human intestinal microvilli.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ul/4ull_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=4ull ConSurf].
 +
<div style="clear:both"></div>
-
==Reference==
+
==See Also==
-
Solution structure of the carbohydrate-binding B-subunit homopentamer of verotoxin VT-1 from E. coli., Richardson JM, Evans PD, Homans SW, Donohue-Rolfe A, Nat Struct Biol. 1997 Mar;4(3):190-3. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=9164458 9164458]
+
*[[Shiga toxin 3D structures|Shiga toxin 3D structures]]
-
[[Category: Bacteriophage h30 and h19b]]
+
__TOC__
-
[[Category: Single protein]]
+
</StructureSection>
-
[[Category: Donohue-Rolfe, A.]]
+
[[Category: Escherichia coli]]
-
[[Category: Evans, P.D.]]
+
[[Category: Large Structures]]
-
[[Category: Homans, S.W.]]
+
[[Category: Donohue-Rolfe A]]
-
[[Category: Richardson, J.M.]]
+
[[Category: Evans PD]]
-
[[Category: signal]]
+
[[Category: Homans SW]]
-
[[Category: toxin]]
+
[[Category: Richardson JM]]
-
 
+
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 19:51:17 2007''
+

Current revision

SOLUTION NMR STRUCTURE OF VEROTOXIN-1 B-SUBUNIT FROM E. COLI, 5 STRUCTURES

PDB ID 4ull

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools