3tgl
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="3tgl" size="450" color="white" frame="true" align="right" spinBox="true" caption="3tgl, resolution 1.9Å" /> '''STRUCTURE AND MOLECUL...) |
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| - | [[Image:3tgl.jpg|left|200px]]<br /><applet load="3tgl" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="3tgl, resolution 1.9Å" /> | ||
| - | '''STRUCTURE AND MOLECULAR MODEL REFINEMENT OF RHIZOMUCOR MIEHEI TRIACYLGLYCERIDE LIPASE: A CASE STUDY OF THE USE OF SIMULATED ANNEALING IN PARTIAL MODEL REFINEMENT'''<br /> | ||
| - | == | + | ==STRUCTURE AND MOLECULAR MODEL REFINEMENT OF RHIZOMUCOR MIEHEI TRIACYLGLYCERIDE LIPASE: A CASE STUDY OF THE USE OF SIMULATED ANNEALING IN PARTIAL MODEL REFINEMENT== |
| - | + | <StructureSection load='3tgl' size='340' side='right'caption='[[3tgl]], [[Resolution|resolution]] 1.90Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | [[ | + | <table><tr><td colspan='2'>[[3tgl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhizomucor_miehei Rhizomucor miehei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TGL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TGL FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tgl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tgl OCA], [https://pdbe.org/3tgl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tgl RCSB], [https://www.ebi.ac.uk/pdbsum/3tgl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tgl ProSAT]</span></td></tr> |
| - | [ | + | </table> |
| - | + | == Function == | |
| - | [ | + | [https://www.uniprot.org/uniprot/LIP_RHIMI LIP_RHIMI] |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | [ | + | Check<jmol> |
| - | [[ | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tg/3tgl_consurf.spt"</scriptWhenChecked> | |
| - | [ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | + | </jmolCheckbox> | |
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3tgl ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Lipase 3D Structures|Lipase 3D Structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Rhizomucor miehei]] | ||
| + | [[Category: Brady L]] | ||
| + | [[Category: Brzozowski AM]] | ||
| + | [[Category: Christiansen L]] | ||
| + | [[Category: Derewenda ZS]] | ||
| + | [[Category: Dodson EJ]] | ||
| + | [[Category: Dodson GG]] | ||
| + | [[Category: Huge-Jensen B]] | ||
| + | [[Category: Norskov L]] | ||
| + | [[Category: Thim L]] | ||
| + | [[Category: Tolley SP]] | ||
| + | [[Category: Turkenburg JP]] | ||
Current revision
STRUCTURE AND MOLECULAR MODEL REFINEMENT OF RHIZOMUCOR MIEHEI TRIACYLGLYCERIDE LIPASE: A CASE STUDY OF THE USE OF SIMULATED ANNEALING IN PARTIAL MODEL REFINEMENT
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