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2fdn

From Proteopedia

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{{Seed}}
 
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[[Image:2fdn.png|left|200px]]
 
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==2[4FE-4S] FERREDOXIN FROM CLOSTRIDIUM ACIDI-URICI==
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The line below this paragraph, containing "STRUCTURE_2fdn", creates the "Structure Box" on the page.
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<StructureSection load='2fdn' size='340' side='right'caption='[[2fdn]], [[Resolution|resolution]] 0.94&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2fdn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gottschalkia_acidurici Gottschalkia acidurici]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FDN FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 0.94&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
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{{STRUCTURE_2fdn| PDB=2fdn | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fdn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fdn OCA], [https://pdbe.org/2fdn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fdn RCSB], [https://www.ebi.ac.uk/pdbsum/2fdn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fdn ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/FER_GOTA9 FER_GOTA9] Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.[UniProtKB:P50727]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fd/2fdn_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fdn ConSurf].
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<div style="clear:both"></div>
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===2[4FE-4S] FERREDOXIN FROM CLOSTRIDIUM ACIDI-URICI===
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==See Also==
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*[[Ferredoxin 3D structures|Ferredoxin 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_9405040}}, adds the Publication Abstract to the page
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[[Category: Gottschalkia acidurici]]
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(as it appears on PubMed at http://www.pubmed.gov), where 9405040 is the PubMed ID number.
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[[Category: Large Structures]]
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[[Category: Dauter Z]]
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{{ABSTRACT_PUBMED_9405040}}
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[[Category: Meyer J]]
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[[Category: Moulis JM]]
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==About this Structure==
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[[Category: Sieker LC]]
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2FDN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_acidurici Clostridium acidurici]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FDN OCA].
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[[Category: Wilson KS]]
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==Reference==
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Atomic resolution (0.94 A) structure of Clostridium acidurici ferredoxin. Detailed geometry of [4Fe-4S] clusters in a protein., Dauter Z, Wilson KS, Sieker LC, Meyer J, Moulis JM, Biochemistry. 1997 Dec 23;36(51):16065-73. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9405040 9405040]
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[[Category: Clostridium acidurici]]
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[[Category: Single protein]]
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[[Category: Dauter, Z.]]
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[[Category: Meyer, J.]]
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[[Category: Moulis, J M.]]
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[[Category: Sieker, L C.]]
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[[Category: Wilson, K S.]]
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[[Category: 4fe-4]]
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[[Category: Electron transport]]
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[[Category: Iron-sulfur]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 00:34:29 2008''
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Current revision

2[4FE-4S] FERREDOXIN FROM CLOSTRIDIUM ACIDI-URICI

PDB ID 2fdn

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