2oxt

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{{Seed}}
 
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[[Image:2oxt.png|left|200px]]
 
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==Crystal structure of Meaban virus nucleoside-2'-O-methyltransferase==
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The line below this paragraph, containing "STRUCTURE_2oxt", creates the "Structure Box" on the page.
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<StructureSection load='2oxt' size='340' side='right'caption='[[2oxt]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2oxt]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Meaban_virus Meaban virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OXT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OXT FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
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{{STRUCTURE_2oxt| PDB=2oxt | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oxt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oxt OCA], [https://pdbe.org/2oxt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oxt RCSB], [https://www.ebi.ac.uk/pdbsum/2oxt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oxt ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0EKU1_9FLAV A0EKU1_9FLAV]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ox/2oxt_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2oxt ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Viral methyltransferases are involved in the mRNA capping process, resulting in the transfer of a methyl group from S-adenosyl-L-methionine to capped RNA. Two groups of methyltransferases (MTases) are known: (guanine-N7)-methyltransferases (N7MTases), adding a methyl group onto the N7 atom of guanine, and (nucleoside-2'-O-)-methyltransferases (2'OMTases), adding a methyl group to a ribose hydroxyl. We have expressed and purified two constructs of Meaban virus (MV; genus Flavivirus) NS5 protein MTase domain (residues 1-265 and 1-293, respectively). We report here the three-dimensional structure of the shorter MTase construct in complex with the cofactor S-adenosyl-L-methionine, at 2.9 angstroms resolution. Inspection of the refined crystal structure, which highlights structural conservation of specific active site residues, together with sequence analysis and structural comparison with Dengue virus 2'OMTase, suggests that the crystallized enzyme belongs to the 2'OMTase subgroup. Enzymatic assays show that the short MV MTase construct is inactive, but the longer construct expressed can transfer a methyl group to the ribose 2'O atom of a short GpppAC(5) substrate. West Nile virus MTase domain has been recently shown to display both N7 and 2'O MTase activity on a capped RNA substrate comprising the 5'-terminal 190 nt of the West Nile virus genome. The lack of N7 MTase activity here reported for MV MTase may be related either to the small size of the capped RNA substrate, to its sequence, or to different structural properties of the C-terminal regions of West Nile virus and MV MTase-domains.
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===Crystal structure of Meaban virus nucleoside-2'-O-methyltransferase===
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Structural bases for substrate recognition and activity in Meaban virus nucleoside-2'-O-methyltransferase.,Mastrangelo E, Bollati M, Milani M, Selisko B, Peyrane F, Canard B, Grard G, de Lamballerie X, Bolognesi M Protein Sci. 2007 Jun;16(6):1133-45. Epub 2007 May 1. PMID:17473012<ref>PMID:17473012</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_17473012}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2oxt" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 17473012 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_17473012}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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2OXT is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Meaban_virus Meaban virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OXT OCA].
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==Reference==
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Structural bases for substrate recognition and activity in Meaban virus nucleoside-2'-O-methyltransferase., Mastrangelo E, Bollati M, Milani M, Selisko B, Peyrane F, Canard B, Grard G, de Lamballerie X, Bolognesi M, Protein Sci. 2007 Jun;16(6):1133-45. Epub 2007 May 1. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17473012 17473012]
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[[Category: Meaban virus]]
[[Category: Meaban virus]]
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[[Category: Single protein]]
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[[Category: Bollati M]]
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[[Category: Bollati, M.]]
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[[Category: Bolognesi M]]
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[[Category: Bolognesi, M.]]
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[[Category: Mastrangelo E]]
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[[Category: Mastrangelo, E.]]
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[[Category: Milani M]]
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[[Category: Milani, M.]]
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[[Category: Flavivirus]]
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[[Category: Nucleoside-2'-o-methyltransferase]]
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[[Category: Rna capping]]
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[[Category: S-adenosyl-l-methionine]]
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[[Category: Viral enzyme]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 01:12:09 2008''
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Current revision

Crystal structure of Meaban virus nucleoside-2'-O-methyltransferase

PDB ID 2oxt

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