Template:STRUCTURE 2a07

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:34, 11 March 2013) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
-
{{StructureD
+
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|2a07, resolution 1.90&Aring; (<scene name='initialview01'>initial scene</scene>)}}}
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2a07]], [[Resolution|resolution]] 1.90&Aring; (<scene name='initialview01'>default scene</scene>)}}}
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
|GENE= FOXP2, CAGH44, TNRC10 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
|GENE= FOXP2, CAGH44, TNRC10 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00059 FH]</span>
+
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a07 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2a07 RCSB], [http://www.ebi.ac.uk/pdbsum/2a07 PDBsum]</span>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a07 OCA], [http://www.ebi.ac.uk/pdbsum/2a07 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2a07 RCSB]</span>
+
|FUNCTION={{GO|id=GO:0043565 | text = sequence-specific DNA binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0042803 | text = protein homodimerization activity}}{{GO|id=GO:0003700 | text = transcription factor activity}}{{GO|id=GO:0003676 | text = nucleic acid binding}}{{GO|id=GO:0003677 | text = DNA binding}}
|FUNCTION={{GO|id=GO:0043565 | text = sequence-specific DNA binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0042803 | text = protein homodimerization activity}}{{GO|id=GO:0003700 | text = transcription factor activity}}{{GO|id=GO:0003676 | text = nucleic acid binding}}{{GO|id=GO:0003677 | text = DNA binding}}
|PROCESS={{GO|id=GO:0006350 | text = transcription}}{{GO|id=GO:0021758 | text = putamen development}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}{{GO|id=GO:0021757 | text = caudate nucleus development}}
|PROCESS={{GO|id=GO:0006350 | text = transcription}}{{GO|id=GO:0021758 | text = putamen development}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}{{GO|id=GO:0021757 | text = caudate nucleus development}}
|COMPONENT={{GO|id=GO:0005622 | text = intracellular}}{{GO|id=GO:0005634 | text = nucleus}}
|COMPONENT={{GO|id=GO:0005622 | text = intracellular}}{{GO|id=GO:0005634 | text = nucleus}}
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001766 Ipr001766], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015880 Ipr015880], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011991 Ipr011991], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR007087 Ipr007087]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00250 PF00250]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?O15409 O15409]</span>
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001766 Ipr001766], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015880 Ipr015880], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011991 Ipr011991], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR007087 Ipr007087]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00250 PF00250]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?O15409 O15409]</span>
 +
|uPDB=2A07|CONSURF={{!}}-
 +
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
 +
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
 +
{{!}} '''Toggle Conservation Colors:'''
 +
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
 +
Rows = identical sequences:
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>A [x]</text>
 +
<name>jmb_2a07_A</name>
 +
<title>toggle chain A</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>C [x]</text>
 +
<name>jmb_2a07_C</name>
 +
<title>toggle chain C</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>B [x]</text>
 +
<name>jmb_2a07_B</name>
 +
<title>toggle chain B</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>D [x]</text>
 +
<name>jmb_2a07_D</name>
 +
<title>toggle chain D</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>E [x]</text>
 +
<name>jmb_2a07_E</name>
 +
<title>toggle chain E</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>F [x]</text>
 +
<name>jmb_2a07_F</name>
 +
<title>toggle chain F</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>G [x]</text>
 +
<name>jmb_2a07_G</name>
 +
<title>toggle chain G</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>H [x]</text>
 +
<name>jmb_2a07_H</name>
 +
<title>toggle chain H</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>I [x]</text>
 +
<name>jmb_2a07_I</name>
 +
<title>toggle chain I</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>J [x]</text>
 +
<name>jmb_2a07_J</name>
 +
<title>toggle chain J</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
}}
}}

Current revision

Drag the structure with the mouse to rotate
2a07, resolution 1.90Å ()
Ligands:
Gene: FOXP2, CAGH44, TNRC10 (Homo sapiens)
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_2a07"
Personal tools