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2hsl

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{{Seed}}
 
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[[Image:2hsl.png|left|200px]]
 
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==NMR structure of 13mer duplex DNA containing an abasic site, averaged structure (alpha anomer)==
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The line below this paragraph, containing "STRUCTURE_2hsl", creates the "Structure Box" on the page.
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<StructureSection load='2hsl' size='340' side='right'caption='[[2hsl]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2hsl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HSL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HSL FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ORP:2-DEOXY-5-PHOSPHONO-RIBOSE'>ORP</scene></td></tr>
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{{STRUCTURE_2hsl| PDB=2hsl | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hsl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hsl OCA], [https://pdbe.org/2hsl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hsl RCSB], [https://www.ebi.ac.uk/pdbsum/2hsl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hsl ProSAT]</span></td></tr>
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</table>
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===NMR structure of 13mer duplex DNA containing an abasic site, averaged structure (alpha anomer)===
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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<!--
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[[Category: Synthetic construct]]
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The line below this paragraph, {{ABSTRACT_PUBMED_17323932}}, adds the Publication Abstract to the page
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[[Category: Case DA]]
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(as it appears on PubMed at http://www.pubmed.gov), where 17323932 is the PubMed ID number.
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[[Category: Chen J]]
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[[Category: Dupradeau FY]]
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{{ABSTRACT_PUBMED_17323932}}
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[[Category: Stubbe J]]
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[[Category: Turner CJ]]
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==About this Structure==
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Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HSL OCA].
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==Reference==
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Nuclear magnetic resonance structural studies and molecular modeling of duplex DNA containing normal and 4'-oxidized abasic sites., Chen J, Dupradeau FY, Case DA, Turner CJ, Stubbe J, Biochemistry. 2007 Mar 20;46(11):3096-107. Epub 2007 Feb 27. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17323932 17323932]
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[[Category: Case, D A.]]
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[[Category: Chen, J.]]
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[[Category: Dupradeau, F Y.]]
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[[Category: Stubbe, J.]]
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[[Category: Turner, C J.]]
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[[Category: Abasic site]]
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[[Category: Ape1]]
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[[Category: Base excision repair]]
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[[Category: Dna lesion]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 03:49:30 2008''
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Current revision

NMR structure of 13mer duplex DNA containing an abasic site, averaged structure (alpha anomer)

PDB ID 2hsl

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