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1pc5

From Proteopedia

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{{Seed}}
 
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[[Image:1pc5.png|left|200px]]
 
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==Crystal Structure of the P50G Mutant of Ferredoxin I at 1.8 A Resolution==
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The line below this paragraph, containing "STRUCTURE_1pc5", creates the "Structure Box" on the page.
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<StructureSection load='1pc5' size='340' side='right'caption='[[1pc5]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1pc5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PC5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PC5 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=F3S:FE3-S4+CLUSTER'>F3S</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
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{{STRUCTURE_1pc5| PDB=1pc5 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pc5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pc5 OCA], [https://pdbe.org/1pc5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pc5 RCSB], [https://www.ebi.ac.uk/pdbsum/1pc5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pc5 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/FER1_AZOVI FER1_AZOVI] Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin could play a role in regulating gene expression by interacting directly with DNA.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pc/1pc5_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pc5 ConSurf].
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<div style="clear:both"></div>
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===Crystal Structure of the P50G Mutant of Ferredoxin I at 1.8 A Resolution===
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==See Also==
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*[[Ferredoxin 3D structures|Ferredoxin 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_12962482}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 12962482 is the PubMed ID number.
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{{ABSTRACT_PUBMED_12962482}}
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==About this Structure==
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1PC5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PC5 OCA].
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==Reference==
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Mechanisms of redox-coupled proton transfer in proteins: role of the proximal proline in reactions of the [3Fe-4S] cluster in Azotobacter vinelandii ferredoxin I., Camba R, Jung YS, Hunsicker-Wang LM, Burgess BK, Stout CD, Hirst J, Armstrong FA, Biochemistry. 2003 Sep 16;42(36):10589-99. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12962482 12962482]
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[[Category: Azotobacter vinelandii]]
[[Category: Azotobacter vinelandii]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Armstrong, F A.]]
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[[Category: Armstrong FA]]
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[[Category: Burgess, B K.]]
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[[Category: Burgess BK]]
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[[Category: Camba, R.]]
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[[Category: Camba R]]
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[[Category: Chen, K.]]
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[[Category: Chen K]]
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[[Category: Hirst, J.]]
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[[Category: Hirst J]]
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[[Category: Hunsicker-Wang, L M.]]
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[[Category: Hunsicker-Wang LM]]
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[[Category: Jung, Y S.]]
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[[Category: Jung YS]]
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[[Category: Stout, C D.]]
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[[Category: Stout CD]]
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[[Category: Electron transport]]
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[[Category: Ferredoxin]]
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[[Category: Iron-sulfur protein]]
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[[Category: Mutant]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 05:04:21 2008''
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Current revision

Crystal Structure of the P50G Mutant of Ferredoxin I at 1.8 A Resolution

PDB ID 1pc5

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