1tlv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:42, 1 May 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1tlv.png|left|200px]]
 
-
<!--
+
==Structure of the native and inactive LicT PRD from B. subtilis==
-
The line below this paragraph, containing "STRUCTURE_1tlv", creates the "Structure Box" on the page.
+
<StructureSection load='1tlv' size='340' side='right'caption='[[1tlv]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1tlv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TLV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TLV FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE'>CME</scene></td></tr>
-
{{STRUCTURE_1tlv| PDB=1tlv | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tlv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tlv OCA], [https://pdbe.org/1tlv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tlv RCSB], [https://www.ebi.ac.uk/pdbsum/1tlv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tlv ProSAT]</span></td></tr>
-
 
+
</table>
-
===Structure of the native and inactive LicT PRD from B. subtilis===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/LICT_BACSU LICT_BACSU] Mediates positive regulation of the glucanase operon (licST) by functioning as an antiterminator factor of transcription. Prevents termination at terminator lic-t.
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_15699035}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 15699035 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tl/1tlv_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_15699035}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
1TLV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TLV OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tlv ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
Activation of the LicT transcriptional antiterminator involves a domain swing/lock mechanism provoking massive structural changes., Graille M, Zhou CZ, Receveur-Brechot V, Collinet B, Declerck N, van Tilbeurgh H, J Biol Chem. 2005 Apr 15;280(15):14780-9. Epub 2005 Feb 7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15699035 15699035]
+
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Collinet, B.]]
+
[[Category: Collinet B]]
-
[[Category: Declerck, N.]]
+
[[Category: Declerck N]]
-
[[Category: Graille, M.]]
+
[[Category: Graille M]]
-
[[Category: Receveur-Brechot, V.]]
+
[[Category: Receveur-Brechot V]]
-
[[Category: Tilbeurgh, H van.]]
+
[[Category: Zhou C-Z]]
-
[[Category: Zhou, C Z.]]
+
[[Category: Van Tilbeurgh H]]
-
[[Category: Activation mechanism]]
+
-
[[Category: Conformational change]]
+
-
[[Category: Crystal structure]]
+
-
[[Category: Dimer structure]]
+
-
[[Category: Histidine phosphorylation]]
+
-
[[Category: Hpr]]
+
-
[[Category: Lict]]
+
-
[[Category: Transcriptional antitermination]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 06:18:14 2008''
+

Current revision

Structure of the native and inactive LicT PRD from B. subtilis

PDB ID 1tlv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools