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1o88

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{{Seed}}
 
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[[Image:1o88.png|left|200px]]
 
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<!--
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==Pectate Lyase C From Erwinia Chrysanthemi at pH 11.2 with 30mM Ca2+==
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The line below this paragraph, containing "STRUCTURE_1o88", creates the "Structure Box" on the page.
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<StructureSection load='1o88' size='340' side='right'caption='[[1o88]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1o88]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Dickeya_chrysanthemi Dickeya chrysanthemi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O88 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1O88 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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{{STRUCTURE_1o88| PDB=1o88 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1o88 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1o88 OCA], [https://pdbe.org/1o88 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1o88 RCSB], [https://www.ebi.ac.uk/pdbsum/1o88 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1o88 ProSAT]</span></td></tr>
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</table>
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===PECTATE LYASE C FROM ERWINIA CHRYSANTHEMI AT PH 11.2 WITH 30MM CA2+===
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== Function ==
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[https://www.uniprot.org/uniprot/PLYC_DICCH PLYC_DICCH] Involved in maceration and soft-rotting of plant tissue.
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== Evolutionary Conservation ==
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<!--
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_12540845}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 12540845 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o8/1o88_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_12540845}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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1O88 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Erwinia_chrysanthemi Erwinia chrysanthemi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O88 OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1o88 ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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Characterization and implications of Ca2+ binding to pectate lyase C., Herron SR, Scavetta RD, Garrett M, Legner M, Jurnak F, J Biol Chem. 2003 Apr 4;278(14):12271-7. Epub 2003 Jan 22. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12540845 12540845]
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</StructureSection>
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[[Category: Erwinia chrysanthemi]]
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[[Category: Dickeya chrysanthemi]]
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[[Category: Pectate lyase]]
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[[Category: Large Structures]]
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[[Category: Single protein]]
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[[Category: Herron SR]]
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[[Category: Herron, S R.]]
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[[Category: Jurnak FA]]
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[[Category: Jurnak, F A.]]
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[[Category: Calcium binding]]
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[[Category: Lyase]]
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[[Category: Parallel beta-helix]]
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[[Category: Pectate lyase cleavage]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 07:45:57 2008''
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Current revision

Pectate Lyase C From Erwinia Chrysanthemi at pH 11.2 with 30mM Ca2+

PDB ID 1o88

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