2jnr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:06, 21 November 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2jnr.png|left|200px]]
 
-
<!--
+
==Discovery and optimization of a natural HIV-1 entry inhibitor targeting the gp41 fusion peptide==
-
The line below this paragraph, containing "STRUCTURE_2jnr", creates the "Structure Box" on the page.
+
<StructureSection load='2jnr' size='340' side='right'caption='[[2jnr]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2jnr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JNR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JNR FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 1 model</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jnr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jnr OCA], [https://pdbe.org/2jnr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jnr RCSB], [https://www.ebi.ac.uk/pdbsum/2jnr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jnr ProSAT]</span></td></tr>
-
{{STRUCTURE_2jnr| PDB=2jnr | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q72502_9HIV1 Q72502_9HIV1] The envelope glyprotein gp160 precursor down-modulates cell surface CD4 antigen by interacting with it in the endoplasmic reticulum and blocking its transport to the cell surface.[RuleBase:RU004292]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
A variety of molecules in human blood have been implicated in the inhibition of HIV-1. However, it remained elusive which circulating natural compounds are most effective in controlling viral replication in vivo. To identify natural HIV-1 inhibitors we screened a comprehensive peptide library generated from human hemofiltrate. The most potent fraction contained a 20-residue peptide, designated VIRUS-INHIBITORY PEPTIDE (VIRIP), corresponding to the C-proximal region of alpha1-antitrypsin, the most abundant circulating serine protease inhibitor. We found that VIRIP inhibits a wide variety of HIV-1 strains including those resistant to current antiretroviral drugs. Further analysis demonstrated that VIRIP blocks HIV-1 entry by interacting with the gp41 fusion peptide and showed that a few amino acid changes increase its antiretroviral potency by two orders of magnitude. Thus, as a highly specific natural inhibitor of the HIV-1 gp41 fusion peptide, VIRIP may lead to the development of another class of antiretroviral drugs.
-
===Discovery and optimization of a natural HIV-1 entry inhibitor targeting the gp41 fusion peptide===
+
Discovery and optimization of a natural HIV-1 entry inhibitor targeting the gp41 fusion peptide.,Munch J, Standker L, Adermann K, Schulz A, Schindler M, Chinnadurai R, Pohlmann S, Chaipan C, Biet T, Peters T, Meyer B, Wilhelm D, Lu H, Jing W, Jiang S, Forssmann WG, Kirchhoff F Cell. 2007 Apr 20;129(2):263-75. PMID:17448989<ref>PMID:17448989</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<!--
+
</div>
-
The line below this paragraph, {{ABSTRACT_PUBMED_17448989}}, adds the Publication Abstract to the page
+
<div class="pdbe-citations 2jnr" style="background-color:#fffaf0;"></div>
-
(as it appears on PubMed at http://www.pubmed.gov), where 17448989 is the PubMed ID number.
+
== References ==
-
-->
+
<references/>
-
{{ABSTRACT_PUBMED_17448989}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
[[Category: Large Structures]]
-
2JNR is a [[Single protein]] structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JNR OCA].
+
[[Category: Synthetic construct]]
-
 
+
[[Category: Adermann K]]
-
==Reference==
+
[[Category: Biet T]]
-
Discovery and optimization of a natural HIV-1 entry inhibitor targeting the gp41 fusion peptide., Munch J, Standker L, Adermann K, Schulz A, Schindler M, Chinnadurai R, Pohlmann S, Chaipan C, Biet T, Peters T, Meyer B, Wilhelm D, Lu H, Jing W, Jiang S, Forssmann WG, Kirchhoff F, Cell. 2007 Apr 20;129(2):263-75. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17448989 17448989]
+
[[Category: Chaipan C]]
-
[[Category: Single protein]]
+
[[Category: Forssmann W]]
-
[[Category: Adermann, K.]]
+
[[Category: Jiang S]]
-
[[Category: Biet, T.]]
+
[[Category: Jing W]]
-
[[Category: Chaipan, C.]]
+
[[Category: Kirchhoff F]]
-
[[Category: Forssmann, W.]]
+
[[Category: Lu H]]
-
[[Category: Jiang, S.]]
+
[[Category: Meyer B]]
-
[[Category: Jing, W.]]
+
[[Category: Munch J]]
-
[[Category: Kirchhoff, F.]]
+
[[Category: Peters T]]
-
[[Category: Lu, H.]]
+
[[Category: Pohlmann S]]
-
[[Category: Meyer, B.]]
+
[[Category: Schulz A]]
-
[[Category: Munch, J.]]
+
[[Category: Standker L]]
-
[[Category: Peters, T.]]
+
[[Category: Wilhelm D]]
-
[[Category: Pohlmann, S.]]
+
-
[[Category: Schulz, A.]]
+
-
[[Category: Standker, L.]]
+
-
[[Category: Wilhelm, D.]]
+
-
[[Category: Peptide complex]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 08:01:12 2008''
+

Current revision

Discovery and optimization of a natural HIV-1 entry inhibitor targeting the gp41 fusion peptide

PDB ID 2jnr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools