This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1sdo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:29, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1sdo.png|left|200px]]
 
-
<!--
+
==Crystal Structure of Restriction Endonuclease BstYI==
-
The line below this paragraph, containing "STRUCTURE_1sdo", creates the "Structure Box" on the page.
+
<StructureSection load='1sdo' size='340' side='right'caption='[[1sdo]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1sdo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SDO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SDO FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sdo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sdo OCA], [https://pdbe.org/1sdo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sdo RCSB], [https://www.ebi.ac.uk/pdbsum/1sdo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sdo ProSAT]</span></td></tr>
-
{{STRUCTURE_1sdo| PDB=1sdo | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal Structure of Restriction Endonuclease BstYI===
+
[https://www.uniprot.org/uniprot/Q84AF2_GEOSE Q84AF2_GEOSE]
-
 
+
__TOC__
-
 
+
</StructureSection>
-
<!--
+
-
The line below this paragraph, {{ABSTRACT_PUBMED_15099740}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 15099740 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_15099740}}
+
-
 
+
-
==About this Structure==
+
-
1SDO is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SDO OCA].
+
-
 
+
-
==Reference==
+
-
Crystal structure of BstYI at 1.85A resolution: a thermophilic restriction endonuclease with overlapping specificities to BamHI and BglII., Townson SA, Samuelson JC, Vanamee ES, Edwards TA, Escalante CR, Xu SY, Aggarwal AK, J Mol Biol. 2004 May 7;338(4):725-33. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15099740 15099740]
+
[[Category: Geobacillus stearothermophilus]]
[[Category: Geobacillus stearothermophilus]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Type II site-specific deoxyribonuclease]]
+
[[Category: Aggarwal AK]]
-
[[Category: Aggarwal, A K.]]
+
[[Category: Edwards TA]]
-
[[Category: Edwards, T A.]]
+
[[Category: Escalante CR]]
-
[[Category: Escalante, C R.]]
+
[[Category: Samuelson JC]]
-
[[Category: Samuelson, J C.]]
+
[[Category: Townson SA]]
-
[[Category: Townson, S A.]]
+
[[Category: Vanamee ES]]
-
[[Category: Vanamee, E S.]]
+
[[Category: Xu SY]]
-
[[Category: Xu, S Y.]]
+
-
[[Category: Restriction endonuclease]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 08:14:41 2008''
+

Current revision

Crystal Structure of Restriction Endonuclease BstYI

PDB ID 1sdo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1sdo"
Personal tools