3c5d

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{{Seed}}
 
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[[Image:3c5d.png|left|200px]]
 
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==Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to lividomycin==
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The line below this paragraph, containing "STRUCTURE_3c5d", creates the "Structure Box" on the page.
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<StructureSection load='3c5d' size='340' side='right'caption='[[3c5d]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3c5d]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C5D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C5D FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=LIV:(2R,3S,4S,5S,6R)-2-((2S,3S,4R,5R,6R)-5-AMINO-2-(AMINOMETHYL)-6-((2R,3S,4R,5S)-5-((1R,2R,3S,5R,6S)-3,5-DIAMINO-2-((2S,3R,5S,6R)-3-AMINO-5-HYDROXY-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-6-HYDROXYCYCLOHEXYLOXY)-4-HYDROXY-2-(HYDROXYMETHYL)-TETRAHYDROFURAN-3-YLOXY)-4-HYDROXY-TETRAHYDRO-2H-PYRAN-3-YLOXY)-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-3,4,5-TRIOL'>LIV</scene>, <scene name='pdbligand=UMS:2-METHYLSELENYL-2-DEOXYURIDINE-5-PHOSPHATE'>UMS</scene></td></tr>
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{{STRUCTURE_3c5d| PDB=3c5d | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c5d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c5d OCA], [https://pdbe.org/3c5d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c5d RCSB], [https://www.ebi.ac.uk/pdbsum/3c5d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c5d ProSAT]</span></td></tr>
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</table>
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===Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to lividomycin===
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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==About this Structure==
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[[Category: Dumas P]]
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3C5D is a [[Single protein]] structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C5D OCA].
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[[Category: Ennifar E]]
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[[Category: Freisz S]]
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==Reference==
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[[Category: Lang K]]
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Binding of aminoglycoside antibiotics to the duplex form of the HIV-1 genomic RNA dimerization initiation site., Freisz S, Lang K, Micura R, Dumas P, Ennifar E, Angew Chem Int Ed Engl. 2008;47(22):4110-3. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18435520 18435520]
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[[Category: Micura R]]
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[[Category: Single protein]]
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[[Category: Dumas, P.]]
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[[Category: Ennifar, E.]]
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[[Category: Freisz, S.]]
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[[Category: Lang, K.]]
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[[Category: Micura, R.]]
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[[Category: Aminoglycoside]]
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[[Category: Extended duplex]]
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[[Category: Hiv-1]]
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[[Category: Lividomycin]]
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[[Category: Rna]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 09:17:29 2008''
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Current revision

Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to lividomycin

PDB ID 3c5d

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