This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ptl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:05, 1 May 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2ptl.png|left|200px]]
 
-
<!--
+
==THREE-DIMENSIONAL SOLUTION STRUCTURE OF AN IMMUNOGLOBULIN LIGHT CHAIN-BINDING DOMAIN OF PROTEIN L. COMPARISON WITH THE IGG-BINDING DOMAINS OF PROTEIN G==
-
The line below this paragraph, containing "STRUCTURE_2ptl", creates the "Structure Box" on the page.
+
<StructureSection load='2ptl' size='340' side='right'caption='[[2ptl]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2ptl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Finegoldia_magna_ATCC_29328 Finegoldia magna ATCC 29328]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PTL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PTL FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ptl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ptl OCA], [https://pdbe.org/2ptl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ptl RCSB], [https://www.ebi.ac.uk/pdbsum/2ptl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ptl ProSAT]</span></td></tr>
-
{{STRUCTURE_2ptl| PDB=2ptl | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===THREE-DIMENSIONAL SOLUTION STRUCTURE OF AN IMMUNOGLOBULIN LIGHT CHAIN-BINDING DOMAIN OF PROTEIN L. COMPARISON WITH THE IGG-BINDING DOMAINS OF PROTEIN G===
+
[https://www.uniprot.org/uniprot/Q53291_FINMA Q53291_FINMA]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_7947810}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 7947810 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pt/2ptl_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_7947810}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ptl ConSurf].
-
2PTL is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Finegoldia_magna Finegoldia magna]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PTL OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
Three-dimensional solution structure of an immunoglobulin light chain-binding domain of protein L. Comparison with the IgG-binding domains of protein G., Wikstrom M, Drakenberg T, Forsen S, Sjobring U, Bjorck L, Biochemistry. 1994 Nov 29;33(47):14011-7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/7947810 7947810]
+
[[Category: Finegoldia magna ATCC 29328]]
-
[[Category: Finegoldia magna]]
+
[[Category: Large Structures]]
-
[[Category: Single protein]]
+
[[Category: Bjoerck L]]
-
[[Category: Bjoerck, L.]]
+
[[Category: Drakenberg T]]
-
[[Category: Drakenberg, T.]]
+
[[Category: Forsen S]]
-
[[Category: Forsen, S.]]
+
[[Category: Sjoebring U]]
-
[[Category: Sjoebring, U.]]
+
[[Category: Wikstroem M]]
-
[[Category: Wikstroem, M.]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 10:12:38 2008''
+

Current revision

THREE-DIMENSIONAL SOLUTION STRUCTURE OF AN IMMUNOGLOBULIN LIGHT CHAIN-BINDING DOMAIN OF PROTEIN L. COMPARISON WITH THE IGG-BINDING DOMAINS OF PROTEIN G

PDB ID 2ptl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2ptl"
Personal tools