2qi2

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{{Seed}}
 
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[[Image:2qi2.png|left|200px]]
 
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==Crystal structure of the Thermoplasma acidophilum Pelota protein==
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The line below this paragraph, containing "STRUCTURE_2qi2", creates the "Structure Box" on the page.
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<StructureSection load='2qi2' size='340' side='right'caption='[[2qi2]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2qi2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoplasma_acidophilum Thermoplasma acidophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QI2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QI2 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qi2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qi2 OCA], [https://pdbe.org/2qi2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qi2 RCSB], [https://www.ebi.ac.uk/pdbsum/2qi2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qi2 ProSAT]</span></td></tr>
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{{STRUCTURE_2qi2| PDB=2qi2 | SCENE= }}
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</table>
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== Function ==
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===Crystal structure of the Thermoplasma acidophilum Pelota protein===
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[https://www.uniprot.org/uniprot/PELO_THEAC PELO_THEAC] May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity.<ref>PMID:17889667</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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The line below this paragraph, {{ABSTRACT_PUBMED_17889667}}, adds the Publication Abstract to the page
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<jmolCheckbox>
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(as it appears on PubMed at http://www.pubmed.gov), where 17889667 is the PubMed ID number.
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qi/2qi2_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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{{ABSTRACT_PUBMED_17889667}}
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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==About this Structure==
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qi2 ConSurf].
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2QI2 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermoplasma_acidophilum Thermoplasma acidophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QI2 OCA].
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<div style="clear:both"></div>
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== References ==
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==Reference==
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<references/>
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Structural and functional insights into Dom34, a key component of no-go mRNA decay., Lee HH, Kim YS, Kim KH, Heo I, Kim SK, Kim O, Kim HK, Yoon JY, Kim HS, Kim do J, Lee SJ, Yoon HJ, Kim SJ, Lee BG, Song HK, Kim VN, Park CM, Suh SW, Mol Cell. 2007 Sep 21;27(6):938-50. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17889667 17889667]
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__TOC__
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[[Category: Single protein]]
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Thermoplasma acidophilum]]
[[Category: Thermoplasma acidophilum]]
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[[Category: Heo, I H.]]
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[[Category: Heo IH]]
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[[Category: Kim, K H.]]
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[[Category: Kim KH]]
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[[Category: Kim, O.]]
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[[Category: Kim O]]
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[[Category: Kim, S K.]]
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[[Category: Kim SK]]
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[[Category: Kim, Y S.]]
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[[Category: Kim YS]]
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[[Category: Lee, H H.]]
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[[Category: Lee HH]]
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[[Category: Suh, S W.]]
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[[Category: Suh SW]]
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[[Category: Cell cycle]]
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[[Category: Dom34]]
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[[Category: Pelota]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 10:38:32 2008''
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Current revision

Crystal structure of the Thermoplasma acidophilum Pelota protein

PDB ID 2qi2

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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