This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1n3q

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:27, 13 March 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1n3q.png|left|200px]]
 
-
<!--
+
==Pterocarpus angolensis lectin complexed with turanose==
-
The line below this paragraph, containing "STRUCTURE_1n3q", creates the "Structure Box" on the page.
+
<StructureSection load='1n3q' size='340' side='right'caption='[[1n3q]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1n3q]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pterocarpus_angolensis Pterocarpus angolensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N3Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1N3Q FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BDF:BETA-D-FRUCTOPYRANOSE'>BDF</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PRD_900047:beta-turanose'>PRD_900047</scene></td></tr>
-
{{STRUCTURE_1n3q| PDB=1n3q | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1n3q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n3q OCA], [https://pdbe.org/1n3q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1n3q RCSB], [https://www.ebi.ac.uk/pdbsum/1n3q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1n3q ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8GSD2_PTEAG Q8GSD2_PTEAG]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n3/1n3q_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1n3q ConSurf].
 +
<div style="clear:both"></div>
-
===Pterocarpus angolensis lectin complexed with turanose===
+
==See Also==
-
 
+
*[[Pal|Pal]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_12595543}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 12595543 is the PubMed ID number.
+
[[Category: Pterocarpus angolensis]]
-
-->
+
[[Category: Beeckmans S]]
-
{{ABSTRACT_PUBMED_12595543}}
+
[[Category: Bouckaert J]]
-
 
+
[[Category: Buts L]]
-
==About this Structure==
+
[[Category: De Greve H]]
-
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N3Q OCA].
+
[[Category: Imberty A]]
-
 
+
[[Category: Loris R]]
-
==Reference==
+
[[Category: Read JS]]
-
Crystal structure of Pterocarpus angolensis lectin in complex with glucose, sucrose, and turanose., Loris R, Imberty A, Beeckmans S, Van Driessche E, Read JS, Bouckaert J, De Greve H, Buts L, Wyns L, J Biol Chem. 2003 May 2;278(18):16297-303. Epub 2003 Feb 19. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12595543 12595543]
+
[[Category: Van Driessche E]]
-
[[Category: Beeckmans, S.]]
+
[[Category: Wyns L]]
-
[[Category: Bouckaert, J.]]
+
-
[[Category: Buts, L.]]
+
-
[[Category: Driessche, E Van.]]
+
-
[[Category: Greve, H De.]]
+
-
[[Category: Imberty, A.]]
+
-
[[Category: Loris, R.]]
+
-
[[Category: Read, J S.]]
+
-
[[Category: Wyns, L.]]
+
-
[[Category: Carbohydrate recognition]]
+
-
[[Category: Lectin]]
+
-
[[Category: Turanose]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 11:17:04 2008''
+

Current revision

Pterocarpus angolensis lectin complexed with turanose

PDB ID 1n3q

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1n3q"
Personal tools