This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


231d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:08, 14 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:231d.png|left|200px]]
 
-
<!--
+
==STRUCTURE OF A DNA-PORPHYRIN COMPLEX==
-
The line below this paragraph, containing "STRUCTURE_231d", creates the "Structure Box" on the page.
+
<StructureSection load='231d' size='340' side='right'caption='[[231d]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[231d]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=231D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=231D FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PCU:CU(II)MESO(4-N-TETRAMETHYLPYRIDYL)PORPHYRIN'>PCU</scene></td></tr>
-
{{STRUCTURE_231d| PDB=231d | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=231d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=231d OCA], [https://pdbe.org/231d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=231d RCSB], [https://www.ebi.ac.uk/pdbsum/231d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=231d ProSAT]</span></td></tr>
-
 
+
</table>
-
===STRUCTURE OF A DNA-PORPHYRIN COMPLEX===
+
__TOC__
-
 
+
</StructureSection>
-
 
+
[[Category: Large Structures]]
-
<!--
+
[[Category: Lipscomb LA]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_8608116}}, adds the Publication Abstract to the page
+
[[Category: Peek ME]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 8608116 is the PubMed ID number.
+
[[Category: Plaskon RR]]
-
-->
+
[[Category: Presnell SR]]
-
{{ABSTRACT_PUBMED_8608116}}
+
[[Category: Williams LD]]
-
 
+
[[Category: Woo RJ]]
-
==About this Structure==
+
[[Category: Zhou FX]]
-
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=231D OCA].
+
-
 
+
-
==Reference==
+
-
Structure of DNA-porphyrin complex., Lipscomb LA, Zhou FX, Presnell SR, Woo RJ, Peek ME, Plaskon RR, Williams LD, Biochemistry. 1996 Mar 5;35(9):2818-23. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8608116 8608116]
+
-
[[Category: Lipscomb, L A.]]
+
-
[[Category: Peek, M E.]]
+
-
[[Category: Plaskon, R R.]]
+
-
[[Category: Presnell, S R.]]
+
-
[[Category: Williams, L D.]]
+
-
[[Category: Woo, R J.]]
+
-
[[Category: Zhou, F X.]]
+
-
[[Category: Complexed with drug]]
+
-
[[Category: Double helix]]
+
-
[[Category: Flipped-out base]]
+
-
[[Category: Right handed dna]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 11:29:44 2008''
+

Current revision

STRUCTURE OF A DNA-PORPHYRIN COMPLEX

PDB ID 231d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/231d"
Personal tools