2pfu

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{{Seed}}
 
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[[Image:2pfu.png|left|200px]]
 
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==NMR structure determination of the periplasmic domain of ExbD from E.coli==
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The line below this paragraph, containing "STRUCTURE_2pfu", creates the "Structure Box" on the page.
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<StructureSection load='2pfu' size='340' side='right'caption='[[2pfu]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2pfu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PFU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PFU FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pfu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pfu OCA], [https://pdbe.org/2pfu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pfu RCSB], [https://www.ebi.ac.uk/pdbsum/2pfu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pfu ProSAT]</span></td></tr>
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{{STRUCTURE_2pfu| PDB=2pfu | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/EXBD_ECOLI EXBD_ECOLI] Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pf/2pfu_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pfu ConSurf].
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<div style="clear:both"></div>
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===NMR strcuture determination of the periplasmic domain of ExbD from E.coli===
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==See Also==
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*[[ExbD|ExbD]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_17927700}}, adds the Publication Abstract to the page
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[[Category: Escherichia coli K-12]]
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(as it appears on PubMed at http://www.pubmed.gov), where 17927700 is the PubMed ID number.
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[[Category: Large Structures]]
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[[Category: Garcia-Herrero A]]
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{{ABSTRACT_PUBMED_17927700}}
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[[Category: Howard PS]]
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[[Category: Peacock SR]]
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==About this Structure==
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[[Category: Vogel HJ]]
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2PFU is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PFU OCA].
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==Reference==
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The solution structure of the periplasmic domain of the TonB system ExbD protein reveals an unexpected structural homology with siderophore-binding proteins., Garcia-Herrero A, Peacock RS, Howard SP, Vogel HJ, Mol Microbiol. 2007 Nov;66(4):872-89. Epub 2007 Oct 10. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17927700 17927700]
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[[Category: Escherichia coli]]
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[[Category: Single protein]]
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[[Category: Garcia-Herrero, A.]]
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[[Category: Howard, P S.]]
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[[Category: Peacock, S R.]]
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[[Category: Vogel, H J.]]
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[[Category: Exbd]]
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[[Category: Periplasmic domain]]
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[[Category: Proton motive force]]
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[[Category: Tonb system]]
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[[Category: Transport protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 12:04:33 2008''
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Current revision

NMR structure determination of the periplasmic domain of ExbD from E.coli

PDB ID 2pfu

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