1k47

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:34, 6 November 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1k47.png|left|200px]]
 
-
<!--
+
==Crystal Structure of the Streptococcus pneumoniae Phosphomevalonate Kinase (PMK)==
-
The line below this paragraph, containing "STRUCTURE_1k47", creates the "Structure Box" on the page.
+
<StructureSection load='1k47' size='340' side='right'caption='[[1k47]], [[Resolution|resolution]] 2.42&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1k47]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_R6 Streptococcus pneumoniae R6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K47 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K47 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.42&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_1k47| PDB=1k47 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k47 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k47 OCA], [https://pdbe.org/1k47 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k47 RCSB], [https://www.ebi.ac.uk/pdbsum/1k47 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k47 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1k47 TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of the Streptococcus pneumoniae Phosphomevalonate Kinase (PMK)===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q8DR49_STRR6 Q8DR49_STRR6]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1K47 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K47 OCA].
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==Reference==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k4/1k47_consurf.spt"</scriptWhenChecked>
-
Crystal structure of the Streptococcus pneumoniae phosphomevalonate kinase, a member of the GHMP kinase superfamily., Romanowski MJ, Bonanno JB, Burley SK, Proteins. 2002 Jun 1;47(4):568-71. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12001237 12001237]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Phosphomevalonate kinase]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Streptococcus pneumoniae]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1k47 ConSurf].
-
[[Category: Bonanno, J B.]]
+
<div style="clear:both"></div>
-
[[Category: Burley, S K.]]
+
__TOC__
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
</StructureSection>
-
[[Category: Romanowski, M J.]]
+
[[Category: Large Structures]]
-
[[Category: Alpha/beta single domain belonging to the ghmp kinase superfamily]]
+
[[Category: Streptococcus pneumoniae R6]]
-
[[Category: Mvak2]]
+
[[Category: Bonanno JB]]
-
[[Category: New york structural genomix research consortium]]
+
[[Category: Burley SK]]
-
[[Category: Nysgxrc]]
+
[[Category: Romanowski MJ]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 13:16:48 2008''
+

Current revision

Crystal Structure of the Streptococcus pneumoniae Phosphomevalonate Kinase (PMK)

PDB ID 1k47

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools