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2qm8

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{{Seed}}
 
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[[Image:2qm8.png|left|200px]]
 
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==MeaB, A Bacterial Homolog of MMAA, in the Nucleotide Free Form==
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The line below this paragraph, containing "STRUCTURE_2qm8", creates the "Structure Box" on the page.
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<StructureSection load='2qm8' size='340' side='right'caption='[[2qm8]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2qm8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Metea Metea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QM8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QM8 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_2qm8| PDB=2qm8 | SCENE= }}
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2hf8|2hf8]], [[2hf9|2hf9]], [[2qm7|2qm7]]</div></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">meaB ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272630 METEA])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qm8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qm8 OCA], [https://pdbe.org/2qm8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qm8 RCSB], [https://www.ebi.ac.uk/pdbsum/2qm8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qm8 ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qm/2qm8_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qm8 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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MeaB is an auxiliary protein that plays a crucial role in the protection and assembly of the B(12)-dependent enzyme methylmalonyl-CoA mutase. Impairments in the human homologue of MeaB, MMAA, lead to methylmalonic aciduria, an inborn error of metabolism. To explore the role of this metallochaperone, its structure was solved in the nucleotide-free form, as well as in the presence of product, GDP. MeaB is a homodimer, with each subunit containing a central alpha/beta-core G domain that is typical of the GTPase family, as well as alpha-helical extensions at the N and C termini that are not found in other metalloenzyme chaperone GTPases. The C-terminal extension appears to be essential for nucleotide-independent dimerization, and the N-terminal region is implicated in protein-protein interaction with its partner protein, methylmalonyl-CoA mutase. The structure of MeaB confirms that it is a member of the G3E family of P-loop GTPases, which contains other putative metallochaperones HypB, CooC, and UreG. Interestingly, the so-called switch regions, responsible for signal transduction following GTP hydrolysis, are found at the dimer interface of MeaB instead of being positioned at the surface of the protein where its partner protein methylmalonyl-CoA mutase should bind. This observation suggests a large conformation change of MeaB must occur between the GDP- and GTP-bound forms of this protein. Because of their high sequence homology, the missense mutations in MMAA that result in methylmalonic aciduria have been mapped onto MeaB and, in conjunction with mutagenesis data, provide possible explanations for the pathology of this disease.
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===MeaB, A Bacterial Homolog of MMAA, in the Nucleotide Free Form===
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Crystal structure and mutagenesis of the metallochaperone MeaB: insight into the causes of methylmalonic aciduria.,Hubbard PA, Padovani D, Labunska T, Mahlstedt SA, Banerjee R, Drennan CL J Biol Chem. 2007 Oct 26;282(43):31308-16. Epub 2007 Aug 28. PMID:17728257<ref>PMID:17728257</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_17728257}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2qm8" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 17728257 is the PubMed ID number.
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== References ==
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-->
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<references/>
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{{ABSTRACT_PUBMED_17728257}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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2QM8 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermomicrobium_roseum Thermomicrobium roseum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QM8 OCA].
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[[Category: Metea]]
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[[Category: Banerjee, R]]
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==Reference==
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[[Category: Drennan, C L]]
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Crystal structure and mutagenesis of the metallochaperone MeaB: insight into the causes of methylmalonic aciduria., Hubbard PA, Padovani D, Labunska T, Mahlstedt SA, Banerjee R, Drennan CL, J Biol Chem. 2007 Oct 26;282(43):31308-16. Epub 2007 Aug 28. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17728257 17728257]
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[[Category: Hubbard, P A]]
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[[Category: Single protein]]
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[[Category: Labunska, T]]
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[[Category: Thermomicrobium roseum]]
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[[Category: Mahlstedt, S A]]
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[[Category: Banerjee, R.]]
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[[Category: Padovani, D]]
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[[Category: Drennan, C L.]]
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[[Category: Chaperone]]
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[[Category: Hubbard, P A.]]
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[[Category: Labunska, T.]]
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[[Category: Mahlstedt, S A.]]
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[[Category: Padovani, D.]]
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[[Category: G protein]]
[[Category: G protein]]
[[Category: G3e]]
[[Category: G3e]]
[[Category: Gtpase]]
[[Category: Gtpase]]
[[Category: Metallochaperone]]
[[Category: Metallochaperone]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 14:11:20 2008''
 

Current revision

MeaB, A Bacterial Homolog of MMAA, in the Nucleotide Free Form

PDB ID 2qm8

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