2fs1

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{{Seed}}
 
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[[Image:2fs1.png|left|200px]]
 
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==solution structure of PSD-1==
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The line below this paragraph, containing "STRUCTURE_2fs1", creates the "Structure Box" on the page.
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<StructureSection load='2fs1' size='340' side='right'caption='[[2fs1]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2fs1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Finegoldia_magna_ATCC_29328 Finegoldia magna ATCC 29328], [https://en.wikipedia.org/wiki/Streptococcus_canis Streptococcus canis], [https://en.wikipedia.org/wiki/Streptococcus_dysgalactiae Streptococcus dysgalactiae], [https://en.wikipedia.org/wiki/Streptococcus_equi Streptococcus equi] and [https://en.wikipedia.org/wiki/Streptococcus_sp. Streptococcus sp.]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FS1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FS1 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fs1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fs1 OCA], [https://pdbe.org/2fs1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fs1 RCSB], [https://www.ebi.ac.uk/pdbsum/2fs1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fs1 ProSAT]</span></td></tr>
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{{STRUCTURE_2fs1| PDB=2fs1 | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q51918_FINMA Q51918_FINMA]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fs/2fs1_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fs1 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Protein G-related albumin-binding (GA) modules are frequently expressed on the surfaces of bacterial cells. The limited amino acid sequence variation among GA modules results in structural and functional differences with possible implications for bacterial pathogenesis and host specificity. In particular, the streptococcal G148-GA3 and F. magna ALB8-GA albumin-binding domains exhibit a degree of structural and dynamic diversity that may account for their varied affinities for different species of albumin. To explore the impact of GA module polymorphisms on albumin binding and specificity, we recently used offset recombinant PCR to shuffle seven artificially constructed representatives of the GA sequence space and scan the phage-displayed recombinant domains for mutations that supported binding to the phylogenetically distinct human and guinea pig serum albumins (HSA and GPSA) (Rozak et al. (2006) Biochemistry 45, 3263-3271). Surprisingly, phage selection revealed an overwhelming preference for a single recombinant domain (PSD-1, phage-selected domain-1) regardless of whether the phages were enriched for their abilities to bind one or both of these albumins. We describe here the NMR-derived structure, dynamics, and stability of unbound PSD-1. Our results demonstrate that increased flexibility is not a requirement for broadened specificity, as had been suggested earlier (Johansson et al. (2002) J. Mol. Biol. 316, 1083-1099), because PSD-1 binds the phylogenetically diverse HSA and GPSA even more tightly than G148-GA3 but is less flexible. The structural basis for albumin-binding specificity is analyzed in light of these new results.
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===solution structure of PSD-1===
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Structure, dynamics, and stability variation in bacterial albumin binding modules: implications for species specificity.,He Y, Rozak DA, Sari N, Chen Y, Bryan P, Orban J Biochemistry. 2006 Aug 22;45(33):10102-9. PMID:16906768<ref>PMID:16906768</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_16906768}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2fs1" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 16906768 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_16906768}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Finegoldia magna ATCC 29328]]
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Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FS1 OCA].
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[[Category: Large Structures]]
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[[Category: Streptococcus canis]]
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==Reference==
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[[Category: Streptococcus dysgalactiae]]
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Structure, dynamics, and stability variation in bacterial albumin binding modules: implications for species specificity., He Y, Rozak DA, Sari N, Chen Y, Bryan P, Orban J, Biochemistry. 2006 Aug 22;45(33):10102-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16906768 16906768]
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[[Category: Streptococcus equi]]
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[[Category: Bryan, P.]]
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[[Category: Streptococcus sp]]
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[[Category: Chen, Y.]]
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[[Category: Bryan P]]
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[[Category: He, Y.]]
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[[Category: Chen Y]]
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[[Category: Orban, J.]]
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[[Category: He Y]]
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[[Category: Rozak, D A.]]
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[[Category: Orban J]]
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[[Category: Sari, N.]]
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[[Category: Rozak DA]]
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[[Category: Psd-1]]
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[[Category: Sari N]]
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[[Category: Solution structure]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 14:18:33 2008''
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Current revision

solution structure of PSD-1

PDB ID 2fs1

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