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1uly

From Proteopedia

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{{Seed}}
 
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[[Image:1uly.png|left|200px]]
 
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==Crystal structure analysis of the ArsR homologue DNA-binding protein from P. horikoshii OT3==
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The line below this paragraph, containing "STRUCTURE_1uly", creates the "Structure Box" on the page.
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<StructureSection load='1uly' size='340' side='right'caption='[[1uly]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1uly]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ULY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ULY FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_1uly| PDB=1uly | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1uly FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uly OCA], [https://pdbe.org/1uly PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1uly RCSB], [https://www.ebi.ac.uk/pdbsum/1uly PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uly ProSAT]</span></td></tr>
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</table>
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===Crystal structure analysis of the ArsR homologue DNA-binding protein from P. horikoshii OT3===
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== Function ==
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[https://www.uniprot.org/uniprot/O59595_PYRHO O59595_PYRHO]
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== Evolutionary Conservation ==
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==About this Structure==
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[[Image:Consurf_key_small.gif|200px|right]]
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1ULY is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ULY OCA].
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Check<jmol>
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<jmolCheckbox>
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==Reference==
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ul/1uly_consurf.spt"</scriptWhenChecked>
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Crystal structure of the PH1932 protein, a unique archaeal ArsR type winged-HTH transcription factor from Pyrococcus horikoshii OT3., Itou H, Yao M, Watanabe N, Tanaka I, Proteins. 2008 Mar;70(4):1631-4. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18076033 18076033]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Pyrococcus horikoshii]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Single protein]]
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</jmolCheckbox>
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[[Category: Itou, H.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1uly ConSurf].
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[[Category: Tanaka, I.]]
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<div style="clear:both"></div>
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[[Category: Watanabe, N.]]
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__TOC__
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[[Category: Yao, M.]]
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</StructureSection>
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[[Category: Dna binding protein]]
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[[Category: Large Structures]]
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[[Category: Helix-turn-helix]]
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[[Category: Pyrococcus horikoshii OT3]]
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[[Category: Structural genomic]]
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[[Category: Itou H]]
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[[Category: Tanaka I]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 15:00:55 2008''
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[[Category: Watanabe N]]
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[[Category: Yao M]]

Current revision

Crystal structure analysis of the ArsR homologue DNA-binding protein from P. horikoshii OT3

PDB ID 1uly

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