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2gdi

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{{Seed}}
 
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[[Image:2gdi.png|left|200px]]
 
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==Crystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphate==
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The line below this paragraph, containing "STRUCTURE_2gdi", creates the "Structure Box" on the page.
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<StructureSection load='2gdi' size='340' side='right'caption='[[2gdi]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2gdi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GDI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GDI FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CCC:CYTIDINE-5-PHOSPHATE-2,3-CYCLIC+PHOSPHATE'>CCC</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=TPP:THIAMINE+DIPHOSPHATE'>TPP</scene></td></tr>
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{{STRUCTURE_2gdi| PDB=2gdi | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gdi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gdi OCA], [https://pdbe.org/2gdi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gdi RCSB], [https://www.ebi.ac.uk/pdbsum/2gdi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gdi ProSAT]</span></td></tr>
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</table>
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===Crystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphate===
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==See Also==
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*[[Riboswitch 3D structures|Riboswitch 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_16728979}}, adds the Publication Abstract to the page
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[[Category: Escherichia coli]]
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(as it appears on PubMed at http://www.pubmed.gov), where 16728979 is the PubMed ID number.
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[[Category: Large Structures]]
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[[Category: Serganov A]]
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{{ABSTRACT_PUBMED_16728979}}
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==About this Structure==
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Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GDI OCA].
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==Reference==
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Structural basis for gene regulation by a thiamine pyrophosphate-sensing riboswitch., Serganov A, Polonskaia A, Phan AT, Breaker RR, Patel DJ, Nature. 2006 Jun 29;441(7097):1167-71. Epub 2006 May 21. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16728979 16728979]
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[[Category: Serganov, A.]]
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[[Category: Riboswitch]]
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[[Category: Thiamine pyrophosphate]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 15:01:58 2008''
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Current revision

Crystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphate

PDB ID 2gdi

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