1u7k

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{{Seed}}
 
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[[Image:1u7k.png|left|200px]]
 
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==Structure of a hexameric N-terminal domain from murine leukemia virus capsid==
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The line below this paragraph, containing "STRUCTURE_1u7k", creates the "Structure Box" on the page.
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<StructureSection load='1u7k' size='340' side='right'caption='[[1u7k]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1u7k]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/AKR_(endogenous)_murine_leukemia_virus AKR (endogenous) murine leukemia virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U7K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1U7K FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_1u7k| PDB=1u7k | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1u7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u7k OCA], [https://pdbe.org/1u7k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1u7k RCSB], [https://www.ebi.ac.uk/pdbsum/1u7k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1u7k ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/u7/1u7k_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1u7k ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Retroviruses are the aetiological agents of a range of human diseases including AIDS and T-cell leukaemias. They follow complex life cycles, which are still only partly understood at the molecular level. Maturation of newly formed retroviral particles is an essential step in production of infectious virions, and requires proteolytic cleavage of Gag polyproteins in the immature particle to form the matrix, capsid and nucleocapsid proteins present in the mature virion. Capsid proteins associate to form a dense viral core that may be spherical, cylindrical or conical depending on the genus of the virus. Nonetheless, these assemblies all appear to be composed of a lattice formed from hexagonal rings, each containing six capsid monomers. Here, we describe the X-ray structure of an individual hexagonal assembly from N-tropic murine leukaemia virus (N-MLV). The interface between capsid monomers is generally polar, consistent with weak interactions within the hexamer. Similar architectures are probably crucial for the regulation of capsid assembly and disassembly in all retroviruses. Together, these observations provide new insights into retroviral uncoating and how cellular restriction factors may interfere with viral replication.
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===Structure of a hexameric N-terminal domain from murine leukemia virus capsid===
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High-resolution structure of a retroviral capsid hexameric amino-terminal domain.,Mortuza GB, Haire LF, Stevens A, Smerdon SJ, Stoye JP, Taylor IA Nature. 2004 Sep 23;431(7007):481-5. PMID:15386017<ref>PMID:15386017</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 1u7k" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_15386017}}, adds the Publication Abstract to the page
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*[[Gag polyprotein 3D structures|Gag polyprotein 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 15386017 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_15386017}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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1U7K is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Viruses Viruses]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U7K OCA].
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[[Category: Haire LF]]
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[[Category: Mortuza GB]]
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==Reference==
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[[Category: Smerdon SJ]]
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High-resolution structure of a retroviral capsid hexameric amino-terminal domain., Mortuza GB, Haire LF, Stevens A, Smerdon SJ, Stoye JP, Taylor IA, Nature. 2004 Sep 23;431(7007):481-5. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15386017 15386017]
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[[Category: Stevens A]]
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[[Category: Single protein]]
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[[Category: Stoye JP]]
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[[Category: Viruses]]
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[[Category: Taylor IA]]
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[[Category: Haire, L F.]]
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[[Category: Mortuza, G B.]]
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[[Category: Smerdon, S J.]]
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[[Category: Stevens, A.]]
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[[Category: Stoye, J P.]]
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[[Category: Taylor, I A.]]
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[[Category: Capsid]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 16:20:46 2008''
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Current revision

Structure of a hexameric N-terminal domain from murine leukemia virus capsid

PDB ID 1u7k

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