2a33

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:45, 21 November 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2a33.png|left|200px]]
 
-
<!--
+
==X-Ray Structure of a Lysine Decarboxylase-Like Protein from Arabidopsis Thaliana Gene AT2G37210==
-
The line below this paragraph, containing "STRUCTURE_2a33", creates the "Structure Box" on the page.
+
<StructureSection load='2a33' size='340' side='right'caption='[[2a33]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2a33]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A33 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2A33 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_2a33| PDB=2a33 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2a33 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a33 OCA], [https://pdbe.org/2a33 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2a33 RCSB], [https://www.ebi.ac.uk/pdbsum/2a33 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2a33 ProSAT], [https://www.topsan.org/Proteins/CESG/2a33 TOPSAN]</span></td></tr>
-
 
+
</table>
-
===X-Ray Structure of a Lysine Decarboxylase-Like Protein from Arabidopsis Thaliana Gene AT2G37210===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/LOG3_ARATH LOG3_ARATH] Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms.<ref>PMID:19837870</ref>
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2A33 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A33 OCA].
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==Reference==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a3/2a33_consurf.spt"</scriptWhenChecked>
-
X-ray crystal structures of the conserved hypothetical proteins from Arabidopsis thaliana gene loci At5g11950 and AT2g37210., Jeon WB, Allard ST, Bingman CA, Bitto E, Han BW, Wesenberg GE, Phillips GN Jr, Proteins. 2006 Dec 1;65(4):1051-4. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17048257 17048257]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2a33 ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Allard, S T.M.]]
+
[[Category: Allard STM]]
-
[[Category: Bingman, C A.]]
+
[[Category: Bingman CA]]
-
[[Category: Bitto, E.]]
+
[[Category: Bitto E]]
-
[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
+
[[Category: Mccoy JG]]
-
[[Category: Jr., G N.Phillips.]]
+
[[Category: Phillips Jr GN]]
-
[[Category: Mccoy, J G.]]
+
[[Category: Wesenberg GE]]
-
[[Category: Wesenberg, G E.]]
+
-
[[Category: At2g37210]]
+
-
[[Category: Center for eukaryotic structural genomic]]
+
-
[[Category: Cesg]]
+
-
[[Category: Lysine decarboxylase-like protein]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 16:58:59 2008''
+

Current revision

X-Ray Structure of a Lysine Decarboxylase-Like Protein from Arabidopsis Thaliana Gene AT2G37210

PDB ID 2a33

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools