3c3q

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{{Seed}}
 
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[[Image:3c3q.png|left|200px]]
 
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==ALIX Bro1-domain:CHMIP4B co-crystal structure==
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The line below this paragraph, containing "STRUCTURE_3c3q", creates the "Structure Box" on the page.
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<StructureSection load='3c3q' size='340' side='right'caption='[[3c3q]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3c3q]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C3Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C3Q FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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{{STRUCTURE_3c3q| PDB=3c3q | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c3q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c3q OCA], [https://pdbe.org/3c3q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c3q RCSB], [https://www.ebi.ac.uk/pdbsum/3c3q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c3q ProSAT]</span></td></tr>
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</table>
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===ALIX Bro1-domain:CHMIP4B co-crystal structure===
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== Function ==
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[https://www.uniprot.org/uniprot/PDC6I_HUMAN PDC6I_HUMAN] Class E VPS protein involved in concentration and sorting of cargo proteins of the multivesicular body (MVB) for incorporation into intralumenal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome. Binds to the phospholipid lysobisphosphatidic acid (LBPA) which is abundant in MVBs internal membranes. The MVB pathway appears to require the sequential function of ESCRT-O, -I,-II and -III complexes. The ESCRT machinery also functions in topologically equivalent membrane fission events, such as the terminal stages of cytokinesis and enveloped virus budding (HIV-1 and other lentiviruses). Appears to be an adapter for a subset of ESCRT-III proteins, such as CHMP4, to function at distinct membranes. Required for completion of cytokinesis. Involved in HIV-1 virus budding. Can replace TSG101 it its role of supporting HIV-1 release; this function implies the interaction with CHMP4B. May play a role in the regulation of both apoptosis and cell proliferation.<ref>PMID:14505569</ref> <ref>PMID:14505570</ref> <ref>PMID:14739459</ref> <ref>PMID:17853893</ref> <ref>PMID:17428861</ref> <ref>PMID:17556548</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_18511562}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 18511562 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c3/3c3q_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_18511562}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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3C3Q is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C3Q OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c3q ConSurf].
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<div style="clear:both"></div>
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==Reference==
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== References ==
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ALIX-CHMP4 interactions in the human ESCRT pathway., McCullough J, Fisher RD, Whitby FG, Sundquist WI, Hill CP, Proc Natl Acad Sci U S A. 2008 Jun 3;105(22):7687-91. Epub 2008 May 29. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18511562 18511562]
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<references/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Protein complex]]
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[[Category: Large Structures]]
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[[Category: Fisher, R D.]]
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[[Category: Fisher RD]]
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[[Category: Hill, C P.]]
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[[Category: Hill CP]]
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[[Category: McCullough, J B.]]
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[[Category: McCullough JB]]
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[[Category: Sundquist, W I.]]
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[[Category: Sundquist WI]]
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[[Category: Whitby, F G.]]
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[[Category: Whitby FG]]
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[[Category: Alix chmp4b bro1 amphipathic-helix]]
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[[Category: Apoptosis]]
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[[Category: Cataract]]
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[[Category: Coiled coil]]
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[[Category: Cytoplasm]]
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[[Category: Disease mutation]]
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[[Category: Host-virus interaction]]
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[[Category: Polymorphism]]
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[[Category: Protein transport]]
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[[Category: Transport]]
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[[Category: Transport protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 17:08:24 2008''
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Current revision

ALIX Bro1-domain:CHMIP4B co-crystal structure

PDB ID 3c3q

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