2frg

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{{Seed}}
 
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[[Image:2frg.png|left|200px]]
 
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==Structure of the immunoglobulin-like domain of human TLT-1==
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The line below this paragraph, containing "STRUCTURE_2frg", creates the "Structure Box" on the page.
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<StructureSection load='2frg' size='340' side='right'caption='[[2frg]], [[Resolution|resolution]] 1.19&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2frg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FRG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FRG FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.19&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2frg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2frg OCA], [https://pdbe.org/2frg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2frg RCSB], [https://www.ebi.ac.uk/pdbsum/2frg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2frg ProSAT]</span></td></tr>
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{{STRUCTURE_2frg| PDB=2frg | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/TRML1_HUMAN TRML1_HUMAN] Cell surface receptor that may play a role in the innate and adaptive immune response.<ref>PMID:15128762</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fr/2frg_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2frg ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Triggering receptor expressed on myeloid cells like transcript-1 (TLT-1) is an abundant platelet-specific, type I transmembrane receptor. The extracellular fragment of TLT-1 consists of a single, immunoglobulin-like domain connected to the platelet cell membrane by a linker region called the stalk. Here we present evidence that a soluble fragment of the TLT-1 extracellular domain is found in serum of humans and mice and that an isoform of similar mass is released from platelets following activation with thrombin. We also report the crystal structure of the immunoglobulin domain of TLT-1 determined at the resolution of 1.19 A. The structure of TLT-1 is similar to other immunoglobulin-like variable domains, particularly those of triggering receptor expressed on myeloid cells-1 (TREM-1), the natural killer cell-activating receptor NKp44, and the polymeric immunoglobulin receptor. Particularly interesting is a 17-amino acid segment of TLT-1, homologous to a fragment of murine TREM-1, which, in turn, showed activity in blocking the TREM-1-mediated inflammatory responses in mice. Structural similarity to TREM-1 and polymeric immunoglobulin receptor, and evidence for a naturally occurring soluble fragment of the TLT-1 extracellular domain, suggest that this immunoglobulin-like domain autonomously plays an as yet unidentified, functional role.
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===Structure of the immunoglobulin-like domain of human TLT-1===
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The structure of the extracellular domain of triggering receptor expressed on myeloid cells like transcript-1 and evidence for a naturally occurring soluble fragment.,Gattis JL, Washington AV, Chisholm MM, Quigley L, Szyk A, McVicar DW, Lubkowski J J Biol Chem. 2006 May 12;281(19):13396-403. Epub 2006 Feb 27. PMID:16505478<ref>PMID:16505478</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_16505478}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2frg" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 16505478 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_16505478}}
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__TOC__
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</StructureSection>
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==About this Structure==
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2FRG is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FRG OCA].
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==Reference==
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The structure of the extracellular domain of triggering receptor expressed on myeloid cells like transcript-1 and evidence for a naturally occurring soluble fragment., Gattis JL, Washington AV, Chisholm MM, Quigley L, Szyk A, McVicar DW, Lubkowski J, J Biol Chem. 2006 May 12;281(19):13396-403. Epub 2006 Feb 27. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16505478 16505478]
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Gattis, J L.]]
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[[Category: Gattis JL]]
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[[Category: Lubkowski, J.]]
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[[Category: Lubkowski J]]
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[[Category: Beta-sandwich]]
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[[Category: Cell surface receptor]]
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[[Category: Immunoglobulin-like]]
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[[Category: Itim]]
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[[Category: Platelet receptor]]
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[[Category: Trem-like]]
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[[Category: Triggering receptor]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 17:26:29 2008''
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Current revision

Structure of the immunoglobulin-like domain of human TLT-1

PDB ID 2frg

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