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1t9p

From Proteopedia

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{{Seed}}
 
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[[Image:1t9p.png|left|200px]]
 
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==Crystal Structure of V44A, G45P Cp Rubredoxin==
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The line below this paragraph, containing "STRUCTURE_1t9p", creates the "Structure Box" on the page.
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<StructureSection load='1t9p' size='340' side='right'caption='[[1t9p]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1t9p]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_pasteurianum Clostridium pasteurianum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T9P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T9P FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
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{{STRUCTURE_1t9p| PDB=1t9p | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t9p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t9p OCA], [https://pdbe.org/1t9p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t9p RCSB], [https://www.ebi.ac.uk/pdbsum/1t9p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t9p ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RUBR_CLOPA RUBR_CLOPA] Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t9/1t9p_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1t9p ConSurf].
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<div style="clear:both"></div>
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===Crystal Structure of V44A, G45P Cp Rubredoxin===
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==See Also==
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*[[Rubredoxin 3D structures|Rubredoxin 3D structures]]
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*[[Rubredoxin PDB structures|Rubredoxin PDB structures]]
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__TOC__
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The line below this paragraph, {{ABSTRACT_PUBMED_15382226}}, adds the Publication Abstract to the page
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</StructureSection>
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(as it appears on PubMed at http://www.pubmed.gov), where 15382226 is the PubMed ID number.
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{{ABSTRACT_PUBMED_15382226}}
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==About this Structure==
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1T9P is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_pasteurianum Clostridium pasteurianum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T9P OCA].
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==Reference==
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Crystallographic studies of V44 mutants of Clostridium pasteurianum rubredoxin: effects of side-chain size on reduction potential., Park IY, Eidsness MK, Lin IJ, Gebel EB, Youn B, Harley JL, Machonkin TE, Frederick RO, Markley JL, Smith ET, Ichiye T, Kang C, Proteins. 2004 Nov 15;57(3):618-25. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15382226 15382226]
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[[Category: Clostridium pasteurianum]]
[[Category: Clostridium pasteurianum]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Eidsness, M K.]]
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[[Category: Eidsness MK]]
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[[Category: Frederick, R O.]]
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[[Category: Frederick RO]]
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[[Category: Gebel, E B.]]
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[[Category: Gebel EB]]
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[[Category: Harley, J L.]]
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[[Category: Harley JL]]
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[[Category: Ichiye, T.]]
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[[Category: Ichiye T]]
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[[Category: Kang, C.]]
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[[Category: Kang C]]
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[[Category: Lin, I J.]]
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[[Category: Lin IJ]]
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[[Category: Machonkin, T E.]]
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[[Category: Machonkin TE]]
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[[Category: Markley, J L.]]
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[[Category: Markley JL]]
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[[Category: Park, I Y.]]
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[[Category: Park IY]]
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[[Category: Smith, E T.]]
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[[Category: Smith ET]]
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[[Category: Youn, B.]]
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[[Category: Youn B]]
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[[Category: Rubredoxin]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 18:48:34 2008''
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Current revision

Crystal Structure of V44A, G45P Cp Rubredoxin

PDB ID 1t9p

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