This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2czr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:45, 13 March 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2czr.png|left|200px]]
 
-
<!--
+
==Crystal structure of TBP-interacting protein (Tk-TIP26) and implications for its inhibition mechanism of the interaction between TBP and TATA-DNA==
-
The line below this paragraph, containing "STRUCTURE_2czr", creates the "Structure Box" on the page.
+
<StructureSection load='2czr' size='340' side='right'caption='[[2czr]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2czr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_kodakarensis_KOD1 Thermococcus kodakarensis KOD1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CZR FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_2czr| PDB=2czr | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2czr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2czr OCA], [https://pdbe.org/2czr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2czr RCSB], [https://www.ebi.ac.uk/pdbsum/2czr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2czr ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of TBP-interacting protein (Tk-TIP26) and implications for its inhibition mechanism of the interaction between TBP and TATA-DNA===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q9V2W6_THEKO Q9V2W6_THEKO]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_16322571}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 16322571 is the PubMed ID number.
+
[[Category: Thermococcus kodakarensis KOD1]]
-
-->
+
[[Category: Inoue T]]
-
{{ABSTRACT_PUBMED_16322571}}
+
[[Category: Kai Y]]
-
 
+
[[Category: Kanaya S]]
-
==About this Structure==
+
[[Category: Matsuda T]]
-
2CZR is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermococcus_kodakarensis Thermococcus kodakarensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZR OCA].
+
[[Category: Matsumura H]]
-
 
+
[[Category: Morikawa M]]
-
==Reference==
+
[[Category: Yamamoto T]]
-
Crystal structure of TBP-interacting protein (Tk-TIP26) and implications for its inhibition mechanism of the interaction between TBP and TATA-DNA., Yamamoto T, Matsuda T, Inoue T, Matsumura H, Morikawa M, Kanaya S, Kai Y, Protein Sci. 2006 Jan;15(1):152-61. Epub 2005 Dec 1. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16322571 16322571]
+
-
[[Category: Single protein]]
+
-
[[Category: Thermococcus kodakarensis]]
+
-
[[Category: Inoue, T.]]
+
-
[[Category: Kai, Y.]]
+
-
[[Category: Kanaya, S.]]
+
-
[[Category: Matsuda, T.]]
+
-
[[Category: Matsumura, H.]]
+
-
[[Category: Morikawa, M.]]
+
-
[[Category: Yamamoto, T.]]
+
-
[[Category: Hyperthermophilic archaeon]]
+
-
[[Category: Zn-finger motif]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 19:20:10 2008''
+

Current revision

Crystal structure of TBP-interacting protein (Tk-TIP26) and implications for its inhibition mechanism of the interaction between TBP and TATA-DNA

PDB ID 2czr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools