2jqd

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{{Seed}}
 
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[[Image:2jqd.png|left|200px]]
 
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==Structure of the Leucine-Rich Repeat domain of LANP==
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The line below this paragraph, containing "STRUCTURE_2jqd", creates the "Structure Box" on the page.
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<StructureSection load='2jqd' size='340' side='right'caption='[[2jqd]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2jqd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JQD FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jqd OCA], [https://pdbe.org/2jqd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jqd RCSB], [https://www.ebi.ac.uk/pdbsum/2jqd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jqd ProSAT]</span></td></tr>
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{{STRUCTURE_2jqd| PDB=2jqd | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/AN32A_MOUSE AN32A_MOUSE] Implicated in a number of cellular processes, including proliferation, differentiation, caspase-dependent and caspase-independent apoptosis, suppression of transformation (tumor suppressor), inhibition of protein phosphatase 2A, regulation of mRNA trafficking and stability in association with ELAVL1, and inhibition of acetyltransferases as part of the INHAT (inhibitor of histone acetyltransferases) complex. Plays a role in E4F1-mediated transcriptional repression.<ref>PMID:17557114</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jq/2jqd_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jqd ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The leucine-rich repeat acidic nuclear protein (Anp32a/LANP) belongs to a family of evolutionarily-conserved phosphoproteins involved in a complex network of protein-protein interactions. In an effort to understand the cellular role, we have investigated the mode of interaction of Anp32a with its partners. As a prerequisite, we solved the structure in solution of the evolutionarily conserved N-terminal leucine-rich repeat (LRR) domain and modeled its interactions with other proteins, taking PP2A as a paradigmatic example. The interaction between the Anp32a LRR domain and the AXH domain of ataxin-1 was probed experimentally. The two isolated and unmodified domains bind with very weak (millimolar) affinity, thus suggesting the necessity either for an additional partner (e.g. other regions of either or both proteins or a third molecule) or for a post-translational modification. Finally, we identified by two-hybrid screening a new partner of the LRR domain, i.e. the microtubule plus-end tracking protein Clip 170/Restin, known to regulate the dynamic properties of microtubules and to be associated with severe human pathologies.
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===Structure of the Leucine-Rich Repeat domain of LANP===
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Structural bases for recognition of Anp32/LANP proteins.,de Chiara C, Menon RP, Pastore A FEBS J. 2008 May;275(10):2548-60. Epub 2008 Apr 10. PMID:18410380<ref>PMID:18410380</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_18410380}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2jqd" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 18410380 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_18410380}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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2JQD is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQD OCA].
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==Reference==
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Structural bases for recognition of Anp32/LANP proteins., de Chiara C, Menon RP, Pastore A, FEBS J. 2008 Apr 10;. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18410380 18410380]
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The Anp32 family of proteins containing leucine-rich repeats., Matilla A, Radrizzani M, Cerebellum. 2005;4(1):7-18. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15895553 15895553]
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NMR assignment of the leucine-rich repeat domain of LANP/Anp32a., de Chiara C, Kelly G, Frenkiel TA, Pastore A, J Biomol NMR. 2007 Jun;38(2):177. Epub 2006 Dec 16. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17180445 17180445]
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[[Category: Mus musculus]]
[[Category: Mus musculus]]
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[[Category: Single protein]]
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[[Category: Pastore A]]
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[[Category: Chiara, C de.]]
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[[Category: De Chiara C]]
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[[Category: Pastore, A.]]
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[[Category: Apoptosis]]
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[[Category: Cerebellar morphogenesis]]
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[[Category: Gene regulation]]
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[[Category: Lanp/anp32a]]
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[[Category: Lrr domain]]
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[[Category: Phosphoprotein]]
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[[Category: Pp2a inhibitor]]
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[[Category: Protein binding]]
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[[Category: Rna shuttling]]
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[[Category: Transcriptional regulation]]
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[[Category: Tumor suppression]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 22:56:09 2008''
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Current revision

Structure of the Leucine-Rich Repeat domain of LANP

PDB ID 2jqd

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