1nkz

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{{Seed}}
 
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[[Image:1nkz.png|left|200px]]
 
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==Crystal structure of LH2 B800-850 from Rps. acidophila at 2.0 Angstrom resolution==
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The line below this paragraph, containing "STRUCTURE_1nkz", creates the "Structure Box" on the page.
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<StructureSection load='1nkz' size='340' side='right'caption='[[1nkz]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1nkz]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodoblastus_acidophilus Rhodoblastus acidophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NKZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NKZ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCL:BACTERIOCHLOROPHYLL+A'>BCL</scene>, <scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene>, <scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene>, <scene name='pdbligand=CXM:N-CARBOXYMETHIONINE'>CXM</scene>, <scene name='pdbligand=RG1:RHODOPIN+B-D-GLUCOSIDE'>RG1</scene></td></tr>
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{{STRUCTURE_1nkz| PDB=1nkz | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nkz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nkz OCA], [https://pdbe.org/1nkz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nkz RCSB], [https://www.ebi.ac.uk/pdbsum/1nkz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nkz ProSAT]</span></td></tr>
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</table>
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===Crystal structure of LH2 B800-850 from Rps. acidophila at 2.0 Angstrom resolution===
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== Function ==
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[https://www.uniprot.org/uniprot/LHA4_RHOAC LHA4_RHOAC] Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_12595263}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 12595263 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nk/1nkz_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_12595263}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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1NKZ is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Rhodoblastus_acidophilus Rhodoblastus acidophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NKZ OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nkz ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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The structure and thermal motion of the B800-850 LH2 complex from Rps.acidophila at 2.0A resolution and 100K: new structural features and functionally relevant motions., Papiz MZ, Prince SM, Howard T, Cogdell RJ, Isaacs NW, J Mol Biol. 2003 Mar 7;326(5):1523-38. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12595263 12595263]
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</StructureSection>
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[[Category: Protein complex]]
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[[Category: Large Structures]]
[[Category: Rhodoblastus acidophilus]]
[[Category: Rhodoblastus acidophilus]]
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[[Category: Cogdell, R J.]]
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[[Category: Cogdell RJ]]
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[[Category: Howard, T]]
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[[Category: Howard T]]
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[[Category: Isaacs, N W.]]
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[[Category: Isaacs NW]]
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[[Category: Papiz, M Z.]]
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[[Category: Papiz MZ]]
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[[Category: Prince, S M.]]
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[[Category: Prince SM]]
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[[Category: Bacteriochlorophyll some]]
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[[Category: Light harvesting complex ii]]
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[[Category: Membrane protein]]
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[[Category: Photosynthesis]]
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[[Category: Rhodopin glucoside]]
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[[Category: Trans-membrane helice]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 03:54:35 2008''
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Current revision

Crystal structure of LH2 B800-850 from Rps. acidophila at 2.0 Angstrom resolution

PDB ID 1nkz

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