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2p5q

From Proteopedia

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{{Seed}}
 
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[[Image:2p5q.png|left|200px]]
 
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<!--
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==Crystal structure of the poplar glutathione peroxidase 5 in the reduced form==
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The line below this paragraph, containing "STRUCTURE_2p5q", creates the "Structure Box" on the page.
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<StructureSection load='2p5q' size='340' side='right'caption='[[2p5q]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2p5q]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Populus_trichocarpa_x_Populus_deltoides Populus trichocarpa x Populus deltoides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P5Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P5Q FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
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{{STRUCTURE_2p5q| PDB=2p5q | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p5q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p5q OCA], [https://pdbe.org/2p5q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p5q RCSB], [https://www.ebi.ac.uk/pdbsum/2p5q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p5q ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A3FNZ8_9ROSI A3FNZ8_9ROSI]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p5/2p5q_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p5q ConSurf].
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<div style="clear:both"></div>
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===Crystal structure of the poplar glutathione peroxidase 5 in the reduced form===
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==See Also==
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*[[Glutathione peroxidase|Glutathione peroxidase]]
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__TOC__
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<!--
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_17531267}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 17531267 is the PubMed ID number.
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[[Category: Populus trichocarpa x Populus deltoides]]
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[[Category: Aubry A]]
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{{ABSTRACT_PUBMED_17531267}}
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[[Category: Corbier C]]
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[[Category: Didierjean C]]
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==About this Structure==
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[[Category: Jacquot J-P]]
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2P5Q is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Populus_trichocarpa_x_populus_deltoides Populus trichocarpa x populus deltoides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P5Q OCA].
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[[Category: Koh CS]]
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[[Category: Mulliert G]]
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==Reference==
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[[Category: Navrot N]]
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Crystal structures of a poplar thioredoxin peroxidase that exhibits the structure of glutathione peroxidases: insights into redox-driven conformational changes., Koh CS, Didierjean C, Navrot N, Panjikar S, Mulliert G, Rouhier N, Jacquot JP, Aubry A, Shawkataly O, Corbier C, J Mol Biol. 2007 Jul 13;370(3):512-29. Epub 2007 Apr 19. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17531267 17531267]
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[[Category: Panjikar S]]
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[[Category: Populus trichocarpa x populus deltoides]]
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[[Category: Rouhier N]]
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[[Category: Single protein]]
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[[Category: Shawkataly O]]
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[[Category: Aubry, A.]]
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[[Category: Corbier, C.]]
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[[Category: Didierjean, C.]]
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[[Category: Jacquot, J P.]]
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[[Category: Koh, C S.]]
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[[Category: Mulliert, G.]]
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[[Category: Navrot, N.]]
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[[Category: Panjikar, S.]]
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[[Category: Rouhier, N.]]
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[[Category: Shawkataly, O.]]
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[[Category: Thioredoxin fold]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 05:39:09 2008''
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Current revision

Crystal structure of the poplar glutathione peroxidase 5 in the reduced form

PDB ID 2p5q

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