1rq5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:24, 14 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1rq5.png|left|200px]]
 
-
<!--
+
==Structural Basis for the Exocellulase Activity of the Cellobiohydrolase CbhA from C. thermocellum==
-
The line below this paragraph, containing "STRUCTURE_1rq5", creates the "Structure Box" on the page.
+
<StructureSection load='1rq5' size='340' side='right'caption='[[1rq5]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1rq5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus Acetivibrio thermocellus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RQ5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RQ5 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PRD_900011:beta-cellotetraose'>PRD_900011</scene></td></tr>
-
{{STRUCTURE_1rq5| PDB=1rq5 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rq5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rq5 OCA], [https://pdbe.org/1rq5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rq5 RCSB], [https://www.ebi.ac.uk/pdbsum/1rq5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rq5 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q59325_ACETH Q59325_ACETH]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rq/1rq5_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1rq5 ConSurf].
 +
<div style="clear:both"></div>
-
===Structural Basis for the Exocellulase Activity of the Cellobiohydrolase CbhA from C. thermocellum===
+
==See Also==
-
 
+
*[[Cellobiohydrolase 3D structures|Cellobiohydrolase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_14756552}}, adds the Publication Abstract to the page
+
[[Category: Acetivibrio thermocellus]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 14756552 is the PubMed ID number.
+
[[Category: Large Structures]]
-
-->
+
[[Category: Chang J]]
-
{{ABSTRACT_PUBMED_14756552}}
+
[[Category: Kataeva IA]]
-
 
+
[[Category: Ljungdahl LG]]
-
==About this Structure==
+
[[Category: Rose JP]]
-
1RQ5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_thermocellum Clostridium thermocellum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RQ5 OCA].
+
[[Category: Schubot FD]]
-
 
+
[[Category: Shah AK]]
-
==Reference==
+
[[Category: Wang BC]]
-
Structural basis for the exocellulase activity of the cellobiohydrolase CbhA from Clostridium thermocellum., Schubot FD, Kataeva IA, Chang J, Shah AK, Ljungdahl LG, Rose JP, Wang BC, Biochemistry. 2004 Feb 10;43(5):1163-70. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/14756552 14756552]
+
-
[[Category: Cellulose 1,4-beta-cellobiosidase]]
+
-
[[Category: Clostridium thermocellum]]
+
-
[[Category: Single protein]]
+
-
[[Category: Chang, J.]]
+
-
[[Category: Kataeva, I A.]]
+
-
[[Category: Ljungdahl, L G.]]
+
-
[[Category: Rose, J P.]]
+
-
[[Category: Schubot, F D.]]
+
-
[[Category: Shah, A K.]]
+
-
[[Category: Wang, B C.]]
+
-
[[Category: Cbha]]
+
-
[[Category: Cellobiohydrolase]]
+
-
[[Category: Exocellulase]]
+
-
[[Category: Family 9]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 05:59:51 2008''
+

Current revision

Structural Basis for the Exocellulase Activity of the Cellobiohydrolase CbhA from C. thermocellum

PDB ID 1rq5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools