2py8

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{{Seed}}
 
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[[Image:2py8.png|left|200px]]
 
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<!--
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==RbcX==
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The line below this paragraph, containing "STRUCTURE_2py8", creates the "Structure Box" on the page.
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<StructureSection load='2py8' size='340' side='right'caption='[[2py8]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2py8]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechocystis_sp._PCC_6803 Synechocystis sp. PCC 6803]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PY8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PY8 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene></td></tr>
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{{STRUCTURE_2py8| PDB=2py8 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2py8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2py8 OCA], [https://pdbe.org/2py8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2py8 RCSB], [https://www.ebi.ac.uk/pdbsum/2py8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2py8 ProSAT]</span></td></tr>
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</table>
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===RbcX===
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== Function ==
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[https://www.uniprot.org/uniprot/RBCX_SYNY3 RBCX_SYNY3] An RbcL-specific chaperone. The central cleft of the RbcX homodimer (RbcX2) binds the C-terminus of an RbcL monomer, stabilizing the C-terminus and probably preventing its reassociation with chaperonin GroEL-ES. At the same time the peripheral region of RbcX2 binds a second RbcL monomer, bridging the RbcL homodimers in the correct orientation. The RbcX2(2)-bound RbcL dimers then assemble into the RbcL8 core (RbcL8-(RbcX2)8). RbcS binding triggers the release of RbcX2.[HAMAP-Rule:MF_00855]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_17881829}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 17881829 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/py/2py8_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_17881829}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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2PY8 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PY8 OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2py8 ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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Structure of the RuBisCO chaperone RbcX from Synechocystis sp. PCC6803., Tanaka S, Sawaya MR, Kerfeld CA, Yeates TO, Acta Crystallogr D Biol Crystallogr. 2007 Oct;63(Pt 10):1109-12. Epub 2007, Sep 19. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17881829 17881829]
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</StructureSection>
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Synechocystis sp.]]
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[[Category: Synechocystis sp. PCC 6803]]
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[[Category: Kerfeld, C A.]]
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[[Category: Kerfeld CA]]
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[[Category: Sawaya, M R.]]
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[[Category: Sawaya MR]]
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[[Category: Tanaka, S.]]
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[[Category: Tanaka S]]
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[[Category: Yeates, T O.]]
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[[Category: Yeates TO]]
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[[Category: All helical fold]]
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[[Category: Chaperone]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 07:09:38 2008''
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Current revision

RbcX

PDB ID 2py8

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