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1pqy

From Proteopedia

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(New page: 200px<br /><applet load="1pqy" size="450" color="white" frame="true" align="right" spinBox="true" caption="1pqy, resolution 2.35&Aring;" /> '''Crystal structure of...)
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[[Image:1pqy.gif|left|200px]]<br /><applet load="1pqy" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1pqy, resolution 2.35&Aring;" />
 
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'''Crystal structure of formyl-coA transferase yfdW from E. coli'''<br />
 
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==Overview==
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==Crystal structure of formyl-coA transferase yfdW from E. coli==
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Crystal structures are reported for free and coenzyme A (CoA) bound forms, of the YfdW protein from Escherichia coli, a representative type III CoA, transferase. The structures reveal a two-domain protomer with interdomain, connections forming a ring-like structure with a large central hole. Two, protomers associate to form a highly intertwined dimer in which the hole, of each ring is filled by the partner molecule. Each protomer binds a, single CoA molecule and these CoA-binding sites are distant from one, another in the dimer.
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<StructureSection load='1pqy' size='340' side='right'caption='[[1pqy]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
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== Structural highlights ==
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==About this Structure==
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<table><tr><td colspan='2'>[[1pqy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PQY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PQY FirstGlance]. <br>
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1PQY is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1PQY OCA].
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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==Reference==
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pqy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pqy OCA], [https://pdbe.org/1pqy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pqy RCSB], [https://www.ebi.ac.uk/pdbsum/1pqy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pqy ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1pqy TOPSAN]</span></td></tr>
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Structure of Escherichia coli YfdW, a type III CoA transferase., Gogos A, Gorman J, Shapiro L, Acta Crystallogr D Biol Crystallogr. 2004 Mar;60(Pt 3):507-11. Epub 2004, Feb 25. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=14993676 14993676]
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/FCTA_ECOLI FCTA_ECOLI] Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pq/1pqy_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pqy ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Burley, S.K.]]
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[[Category: Burley SK]]
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[[Category: Gogos, A.]]
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[[Category: Gogos A]]
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[[Category: Gorman, J.]]
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[[Category: Gorman J]]
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[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
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[[Category: Shapiro L]]
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[[Category: Shapiro, L.]]
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[[Category: intertwined dimer]]
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[[Category: new york structural genomix research consortium]]
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[[Category: nysgxrc]]
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[[Category: protein structure initiative]]
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[[Category: psi]]
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[[Category: structural genomics]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 00:02:34 2007''
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Current revision

Crystal structure of formyl-coA transferase yfdW from E. coli

PDB ID 1pqy

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