This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1zps

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:06, 14 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1zps.png|left|200px]]
 
-
<!--
+
==Crystal structure of Methanobacterium thermoautotrophicum phosphoribosyl-AMP cyclohydrolase HisI==
-
The line below this paragraph, containing "STRUCTURE_1zps", creates the "Structure Box" on the page.
+
<StructureSection load='1zps' size='340' side='right'caption='[[1zps]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1zps]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus Methanothermobacter thermautotrophicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZPS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZPS FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
-
{{STRUCTURE_1zps| PDB=1zps | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zps FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zps OCA], [https://pdbe.org/1zps PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zps RCSB], [https://www.ebi.ac.uk/pdbsum/1zps PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zps ProSAT], [https://www.topsan.org/Proteins/BSGI/1zps TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/HIS3_METTH HIS3_METTH] Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zp/1zps_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zps ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of Methanobacterium thermoautotrophicum phosphoribosyl-AMP cyclohydrolase HisI===
+
==See Also==
-
 
+
*[[Cyclohydrolase 3D structures|Cyclohydrolase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_16042384}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 16042384 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_16042384}}
+
-
 
+
-
==About this Structure==
+
-
1ZPS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus Methanothermobacter thermautotrophicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZPS OCA].
+
-
 
+
-
==Reference==
+
-
Crystal structure of Methanobacterium thermoautotrophicum phosphoribosyl-AMP cyclohydrolase HisI., Sivaraman J, Myers RS, Boju L, Sulea T, Cygler M, Jo Davisson V, Schrag JD, Biochemistry. 2005 Aug 2;44(30):10071-80. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16042384 16042384]
+
[[Category: Methanothermobacter thermautotrophicus]]
[[Category: Methanothermobacter thermautotrophicus]]
-
[[Category: Phosphoribosyl-AMP cyclohydrolase]]
+
[[Category: Boju L]]
-
[[Category: Single protein]]
+
[[Category: Cygler M]]
-
[[Category: BSGI, Montreal-Kingston Bacterial Structural Genomics Initiative.]]
+
[[Category: Davisson VJ]]
-
[[Category: Boju, L.]]
+
[[Category: Myers RS]]
-
[[Category: Cygler, M.]]
+
[[Category: Schrag JD]]
-
[[Category: Davisson, V J.]]
+
[[Category: Sivaraman J]]
-
[[Category: Myers, R S.]]
+
[[Category: Sulea T]]
-
[[Category: Schrag, J D.]]
+
-
[[Category: Sivaraman, J.]]
+
-
[[Category: Sulea, T.]]
+
-
[[Category: Bsgi]]
+
-
[[Category: Histidine biosynthesis]]
+
-
[[Category: Montreal-kingston bacterial structural genomics initiative]]
+
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 09:49:33 2008''
+

Current revision

Crystal structure of Methanobacterium thermoautotrophicum phosphoribosyl-AMP cyclohydrolase HisI

PDB ID 1zps

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools