This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2gcv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:27, 14 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2gcv.png|left|200px]]
 
-
<!--
+
==Post-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme==
-
The line below this paragraph, containing "STRUCTURE_2gcv", creates the "Structure Box" on the page.
+
<StructureSection load='2gcv' size='340' side='right'caption='[[2gcv]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2gcv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Caldanaerobacter_subterraneus_subsp._tengcongensis Caldanaerobacter subterraneus subsp. tengcongensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GCV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GCV FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A23:ADENOSINE-5-PHOSPHATE-2,3-CYCLIC+PHOSPHATE'>A23</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
{{STRUCTURE_2gcv| PDB=2gcv | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gcv OCA], [https://pdbe.org/2gcv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gcv RCSB], [https://www.ebi.ac.uk/pdbsum/2gcv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gcv ProSAT]</span></td></tr>
 +
</table>
-
===Post-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme===
+
==See Also==
-
 
+
*[[Ribozyme 3D structures|Ribozyme 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_16990543}}, adds the Publication Abstract to the page
+
[[Category: Caldanaerobacter subterraneus subsp. tengcongensis]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 16990543 is the PubMed ID number.
+
[[Category: Large Structures]]
-
-->
+
[[Category: Ferre-D'Amare AR]]
-
{{ABSTRACT_PUBMED_16990543}}
+
[[Category: Klein DJ]]
-
 
+
-
==About this Structure==
+
-
2GCV is a [[Single protein]] structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GCV OCA].
+
-
 
+
-
==Reference==
+
-
Structural basis of glmS ribozyme activation by glucosamine-6-phosphate., Klein DJ, Ferre-D'Amare AR, Science. 2006 Sep 22;313(5794):1752-6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16990543 16990543]
+
-
[[Category: Single protein]]
+
-
[[Category: Amare, A R.Ferre-D.]]
+
-
[[Category: Klein, D J.]]
+
-
[[Category: Helix]]
+
-
[[Category: Pseudoknot]]
+
-
[[Category: Ribozyme]]
+
-
[[Category: Rna]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 09:57:29 2008''
+

Current revision

Post-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme

PDB ID 2gcv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools